|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL35
(D)
,
OCL35-12
(D)
,
OCL35-13
(D)
,
OCL35-4
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
sibE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
sibE
Search strains by all related name:
sibE b4611 ECK4420 QUAD1e rygE
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
sibE
|
|
Alternative name
|
b4611,ECK4420,QUAD1e,rygE
|
|
Location, Length
|
3,193,121 - 3,193,262
(
-
)
;
68.82
min
;
142
(bp) ,
|
|
Product
|
sRNA antisense regulator of toxic IbsE protein
|
|
Operon Name
|
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 caacaggata aaaaaggcta accggaaagc
-070 ggttcacaga tctcgcttcg tacatggcag gcctattgac gctgttgttt tttcaaccta gagtaaagga
0001 acaagggtaa gggaggattt ctcccccctc tgatgagttg ttagtaagtc gggaaactta acagtaacaa
0071 cacaaccagt atgatgacga gcttcatcat aaccctttcc ttatacaagg ccccttcttc gggaggggct
0141 ttcccgtttc agccccttgc tgccccccga ttgttgatga gcgccggacc ccgcgcaatg ctttcccaga
0211 ggcaattttg ccttccccga gcggtcacgc aa
|
