|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL48,49-4 (BK6-8 / AK4-8)
(D)
,
OCL49-3
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
micA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
micA
Search strains by all related name:
micA b4442 ECK2682 JWR0246 psrA10 sraD
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
micA
|
|
Alternative name
|
b4442,ECK2682,JWR0246,psrA10,sraD
|
|
Location, Length
|
2,812,824 - 2,812,901
(
+
)
;
60.63
min
;
78
(bp) ,
|
|
Product
|
sRNA antisense regulator of ompA, lamB, ompX, and phoP; Hfq-dependent
|
|
Operon Name
|
micA
|
|
Note
|
identified in a large scale screen
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGATCGACTG TGAAGCTATC TAACAACGGC
-070 ATTTAGCCAC CTCCGGTAAT TTTTTTAAAA ATTTTCTGAA CTCTTTCTTC CCAGGCGAGT CTGAGTATAT
0001 gaaagacgcg catttgttat catcatccct gaattcagag atgaaatttt ggccactcac gagtggcctt
0071 tttcttttCT GTCAGGCGTG TTTTTCCAGC CACACCGCAA ACGGTTCGGT ATCAGCGGCT TCCATTTCCT
0141 GCTGACGGCG TTCAGACGCC TCGCGCTCGG CTACAAAA
|
