|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL53,54-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ohsC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ohsC
Search strains by all related name:
ohsC b4608 ECK4417 ryfC
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
ohsC
|
|
Alternative name
|
b4608,ECK4417,ryfC
|
|
Location, Length
|
2,698,542 - 2,698,618
(
+
)
;
58.16
min
;
77
(bp) ,
|
|
Product
|
sRNA antisense regulator of shoB toxin
|
|
Operon Name
|
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CTTTCCATCA ATATTGCTTT CTTCGTAAAG
-070 GCTCGAGTTT TTATGCTAAA GATTGCAAGT TGCTTGTAAA AGATAAGTAC ACTGATCCAT AATCGCTGTT
0001 gttgagggtg catgctgcac aaaattaaag ttaaaaagta aaacccccgt tccttaccag ttcgggggtt
0071 ttactttTTA AAGAGAACGG TATTATTTTT AACTTTCAAT AATTACCGTG GCACAAGCAT AGTGCCGCTC
0141 ATCTGCCAGC GTTACATGCA TATTTGCAAC GCCCAGC
|
