|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL54
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
glmY
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
glmY
Search strains by all related name:
glmY b4441 ECK2554 JWR0245 sroF tke1
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
glmY
|
|
Alternative name
|
b4441,ECK2554,JWR0245,sroF,tke1
|
|
Location, Length
|
2,689,179 - 2,689,362
(
-
)
;
57.96
min
;
184
(bp) ,
|
|
Product
|
sRNA activator of glmS mRNA, glmZ processing antagonist
|
|
Operon Name
|
glmY
|
|
Note
|
identified in a large scale screen
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttcaaacagc ggaggagaca taaacccctc
-070 aaagcaacgt ataatcagta cgttaccaaa ctattttctt tattggcaca gttactgcat aatagtaacc
0001 agtggctcat tcaccgactt atgtcagccc cttcgggacg tgctacataa aatacgaatg acgcacaaca
0071 aggtgcctgc cgtccaactt ctgatatcag cgtagctata tcaaccatcg ggcgaaacgt cgagttaggc
0141 accgccttat tccataacaa agccgggtaa ttcccggctt tgttgtatct gaacttcccc tcggttagca
0211 tcaggctatt cgcgtctgac gagagtaaca ccttgaaacg ctggcccgtt tttccccgct cattacgaca
0281 actg
|
