|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
16-1-2
(LD)
,
DE(sbcB-rfb)202
,
OCL74-2,75-5 (LD 16-1-2_CRS)
(D)
,
OCL74-2,75-6 (LD 16-1-2_P/O)
(D)
,
OCL74-3
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
sibB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
sibB
Search strains by all related name:
sibB b4437 ECK2069 JWR0242 QUAD1b ryeD tpe60
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
sibB
|
|
Alternative name
|
b4437,ECK2069,JWR0242,QUAD1b,ryeD,tpe60
|
|
Location, Length
|
2,151,668 - 2,151,803
(
+
)
;
46.38
min
;
136
(bp) ,
|
|
Product
|
sRNA antisense regulator of toxic IbsB protein
|
|
Operon Name
|
|
|
Note
|
identified in a large scale screen
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGATTATTGC GTAACGACTC GCAAAGAATA
-070 TTTGCTGGCA GGATCGCAGA CTACAAAGCC TGCGGATTGA CAATCTTATC GTGAAGGCAT ACTTTCAGGA
0001 gtgagggtag agcggggttt cccccgccct ggtagtctta gtaagcgggg aagcttatga ctaagagcac
0071 cacgatgatg agtagcttca tcatgaccct ttccttattt atggcccctt cctcgggagg ggctttCCCG
0141 TTTCAGCGTC CCGCTGAAAT CGTCGGCTTA CCTCCTTTCG CCATGCAAGC AGTCTATCGC TAACGCGTAG
0211 ATAAAATAGT TTCCTGTGTT ATTACT
|
