|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
LD3-5-1
(LD)
,
OCL77
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
rseX
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
rseX
Search strains by all related name:
rseX b4603 ECK4412 IS96
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
rseX
|
|
Alternative name
|
b4603,ECK4412,IS96
|
|
Location, Length
|
2,031,673 - 2,031,763
(
+
)
;
43.79
min
;
91
(bp) ,
|
|
Product
|
sRNA antisense regulator of ompA and ompC translation, Hfq-dependent
|
|
Operon Name
|
rseX
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GTGAATACAG GAAAAATCGT TTTGAGCGAT
-070 TTTATTTATC TTTGATATCG GCTTTATTAA TTCATTTAAT CAATATATTA GCACTGATTA CAATTATACC
0001 tttttattat tctgtgtcat gatgcttccg ttattagcct tttatcgtct tgtttatatt ttttgggccg
0071 gcatgatgcc ggcttttttt tATGCCTTCA TTAATGTGCG CCTGATCACA CCAGCCGTTT GGCGCAACAA
0141 TCATTGATAC CCCCTATGTT TCCGCTCAAC TCATAACATA TTGATATACA T
|
