MG1655
W3110
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rmisc_RNA Report : tff
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion OCR33,34-1 (D)  ,  OCR33,34-2 (D)  ,  OCR33,35-4 (AK4-2 / BK5-2) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  tff
Related strains
     Strains Search Search strains by gene name:  tff   Search strains by all related name:  tff b4414 ECK0167 JWR0225 t44

General information  (Go to Linear View:)
 misc_RNA Name tff  
 Alternative name b4414,ECK0167,JWR0225,t44  
 Location, Length 189,712 - 189,847 (  +  ) ;   4.09 min ; 136 (bp) , Go to Linear View
 Product novel sRNA, function unknown  
 Operon Name tff-rpsB-tsf  
 Note identified in a large scale screen  
 Function  
 Gene Ontology  
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   180.0  –  205.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc tff 

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             GCCACTGAAG GTTTTCTATA ATAGAAAATT 
-070 CGACGTCTGA TGCTGTACAC AGCGCCAACA ATTATTGGTG TCCACGACGT ATTTGTGGTA TAAAGCGCGC 
0001 cggacttccg atccatttcg tatacacaga ctggacggaa gcgacaatct cactttgtgt aacaacacac 
0071 acgtatcggc acatattccg gggtgccctt tggggtcggt aatatgggat acgtggaggc ataaccCCAA 
0141 CTTTTATATA GAGGTTTTAA TCATGGCAAC TGTTTCCATG CGCGACATGC TCAAGGCTGG TGTTCACTTC 
0211 GGTCACCAGA CCCGTTACTG GAACCC