MG1655
W3110
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tRNA Report : metU
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK. ( 9729611 )
     Deletion OCR47-14 (BK5-3 / AK4-3-27) (D)  ,  OCR47-15 (BK5-3 / AK4-3-29) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  metU
Related strains
     Strains Search Search strains by gene name:  metU   Search strains by all related name:  metU b0666 ECK0657 JWR0013 metTbeta

General information  (Go to Linear View:)
 tRNA Name metU  
 Alternative name b0666,ECK0657,JWR0013,metTbeta  
 Location, Length 695,887 - 695,963 (  -  ) ;   15.00 min ; 77 (bp) , Go to Linear View
 Product tRNA-Met  
 Operon Name metT-leuW-glnUW-metU-glnVX  
 Note anticodon: CAU  
 Function  
 Gene Ontology  
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   685.0  –  710.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc metU 

MMBR References
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H. ( 2184240 )

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             gcccggttat tggggtatcg ccaagcggta 
-070 aggcaccggt ttttgatacc ggcattccct ggttcgaatc caggtacccc agccatcgaa gaaacaatct 
0001 ggctacgtag ctcagttggt tagagcacat cactcataat gatggggtca caggttcgaa tcccgtcgta 
0071 gccaccaaat tctgaatgta tcgaatatgt tcggcaaatt caaaaccaat ttgttggggt atcgccaagc 
0141 ggtaaggcac cggattctga ttccggcatt ccgaggt