MG1655
W3110
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tRNA Report : glyT
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)  
     Deletion OCR10,11-11 (AK1-16 / BK2-16) (D)  ,  OCR10,11-16 (BK5-16 / AK7-16) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  glyT
Related strains
     Strains Search Search strains by gene name:  glyT   Search strains by all related name:  glyT b3978 ECK3969 JWR0105 sumA sup15B supA36

General information  (Go to Linear View:)
 tRNA Name glyT  
 Alternative name b3978,ECK3969,JWR0105,sumA,sup15B,supA36  
 Location, Length 4,173,696 - 4,173,770 (  +  ) ;   89.96 min ; 75 (bp) , Go to Linear View
 Product tRNA-Gly  
 Operon Name thrU-tyrU-glyT-thrT-tufB  
 Note anticodon: UCC  
 Function  
 Gene Ontology  
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   4165.0  –  4190.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc glyT 

MMBR References
Nature. 1981;294(5840):422-7.
Dual function transcripts specifying tRNA and mRNA.
Hudson L, Rossi J, Landy A. ( 7312036 )
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H. ( 2184240 )
Cell. 1981;25(1):251-8.
Location of the tufB promoter of E. coli: cotranscription of tufB with four transfer RNA genes.
Lee JS, An G, Friesen JD, Fill NP. ( 6168388 )
Cell. 1979;16(3):523-34.
Structure and organization of the two tRNATyr gene clusters on the E. coli chromosome.
Rossi JJ, Landy A. ( 378394 )
Gene. 1980;12(1-2):33-9.
The nucleotide sequence of tufB and four nearby tRNA structural genes of Escherichia coli.
An G, Friesen JD. ( 7011904 )

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             GGCGTAGCCC GAGACGATAA GTTCGCTTAC 
-070 CGGCTCGAAT AAAGAGAGCT TCTCTCGATA TTCAGTGCAG AATGAAAATC AGGTAGCCGA GTTCCAGGAT 
0001 gcgggcatcg tataatggct attacctcag ccttccaagc tgatgatgcg ggttcgattc ccgctgcccg 
0071 ctccaAGATG TGCTGATATA GCTCAGTTGG TAGAGCGCAC CCTTGGTAAG GGTGAGGTCG GCAGTTCGAA 
0141 TCTGCCTATC AGCACCACTT CTTTTCTCCT CCCTG