MG1655
W3110
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tRNA Report : glnX
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK. ( 9729611 )
     Deletion OCR47-14 (BK5-3 / AK4-3-27) (D)  ,  OCR47-15 (BK5-3 / AK4-3-29) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  glnX
Related strains
     Strains Search Search strains by gene name:  glnX   Search strains by all related name:  glnX b0664 ECK0655 glnVbeta JWR0011 supE

General information  (Go to Linear View:)
 tRNA Name glnX  
 Alternative name b0664,ECK0655,glnVbeta,JWR0011,supE  
 Location, Length 695,653 - 695,727 (  -  ) ;   14.99 min ; 75 (bp) , Go to Linear View
 Product tRNA-Gln  
 Operon Name metT-leuW-glnUW-metU-glnVX  
 Note anticodon: CUG  
 Function  
 Gene Ontology  
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   685.0  –  710.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc glnX 

MMBR References
Microbiol. Rev. 1988;52:354-374.
Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.
Eggertsson, G., and D. Soll.
Microbiol. Rev. 1985;49:379-397.
Structure and organization of the transfer ribonucleic acid genes of Escherichia coli K-12.
Fournier, M. J., and H. Ozeki.
J Mol Biol. 1979;132(4):649-62.
Identification of transfer RNA suppressors in Escherichia coli. I. Amber suppressor su+2, an anticodon mutant of tRNA2Gln.
Inokuchi H, Yamao F, Sakano H, Ozeki H. ( 160949 )
J Mol Biol. 1979;132(4):663-77.
Identification of transfer RNA suppressors in Escherichia coli. II. Duplicate genes for tRNA2Gln.
Inokuchi H, Kodaira M, Yamao F, Ozeki H. ( 160950 )
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H. ( 2184240 )
Cell. 1981;23(1):239-49.
Organization and structure of an E. coli tRNA operon containing seven tRNA genes.
Nakajima N, Ozeki H, Shimura Y. ( 6163550 )
J Biol Chem. 1982;257:11113-11120
In vitro transcription of the supB-E tRNA operon of Escherichia coli.
Nakajima, N., H. Ozeki, and Y. Shimura.
Mol Gen Genet. 1987;209(3):618-20.
Organisation of the Escherichia coli chromosome between genes glnS and glnU, V.
Plumbridge J. ( 2828887 )

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             aagcggtaag gcaccggatt ctgattccgg 
-070 cattccgagg ttcgaatcct cgtaccccag ccaatttatt caagacgctt accttgtaag tgcacccagt 
0001 tggggtatcg ccaagcggta aggcaccgga ttctgattcc ggcattccga ggttcgaatc ctcgtacccc 
0071 agccacatta aaaaagctcg cttcggcgag ctttttgctt ttctgcgttc attcaatgtc gaatgcgatg 
0141 ttgacacgtc ttatccttca atgtcggatg cgacg