MG1655
W3110
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tRNA Report : proM
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)  
     Deletion OCR03 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  proM
Related strains
     Strains Search Search strains by gene name:  proM   Search strains by all related name:  proM b3799 ECK3792 JWR0091 proU

General information  (Go to Linear View:)
 tRNA Name proM  
 Alternative name b3799,ECK3792,JWR0091,proU  
 Location, Length 3,980,758 - 3,980,834 (  +  ) ;   85.80 min ; 77 (bp) , Go to Linear View
 Product tRNA-Pro  
 Operon Name argX-hisR-leuT-proM  
 Note anticodon: UGG  
 Function  
 Gene Ontology  
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   3970.0  –  3995.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc proM 

MMBR References
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H. ( 2184240 )
Science. 1992;257(5071):771-8.
Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes.
Daniels DL, Plunkett G 3rd, Burland VD, Blattner FR. ( 1379743 )

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             AGCTTCAGGT GTTAGTGTCC TTACGGACGT 
-070 GGGGGTTCAA GTCCCCCCCC TCGCACCACG ACTTTAAAGA ATTGAACTAA AAATTCAAAA AGCAGTATTT 
0001 cggcgagtag cgcagcttgg tagcgcaact ggtttgggac cagtgggtcg gaggttcgaa tcctctctcg 
0071 ccgaccaATT TTGAACCCCG CTTCGGCGGG GTTTTTTGTT TTCTGTGCAT TTCGTCACCC TCCCTTCGCA 
0141 ATAAACGCCC GTAATAACTC ATTGCCCCAC GGTATGA