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PEC Original Annotations
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Essentiality
|
|
Class
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essential
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References (PMID)
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|
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Deletion
|
OCR03
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
proM
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
proM
Search strains by all related name:
proM b3799 ECK3792 JWR0091 proU
|
General information (Go to Linear View: )
|
|
tRNA Name
|
proM
|
|
Alternative name
|
b3799,ECK3792,JWR0091,proU
|
|
Location, Length
|
3,980,758 - 3,980,834
(
+
)
;
85.80
min
;
77
(bp) ,
|
|
Product
|
tRNA-Pro
|
|
Operon Name
|
argX-hisR-leuT-proM
|
|
Note
|
anticodon: UGG
|
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Function
|
|
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Gene Ontology
|
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PID
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EC number
(KEGG Pathway)
|
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
(database updated :
2007.02.20
)
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PSI-BLAST
|
|
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SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
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PSI-BLAST
|
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nr
(database updated :
2007.02.20
)
|
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BLAST
|
|
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
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PROSITE
|
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MMBR References
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
Science. 1992;257(5071):771-8.
Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes.
Daniels DL, Plunkett G 3rd, Burland VD, Blattner FR.
(
1379743
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AGCTTCAGGT GTTAGTGTCC TTACGGACGT
-070 GGGGGTTCAA GTCCCCCCCC TCGCACCACG ACTTTAAAGA ATTGAACTAA AAATTCAAAA AGCAGTATTT
0001 cggcgagtag cgcagcttgg tagcgcaact ggtttgggac cagtgggtcg gaggttcgaa tcctctctcg
0071 ccgaccaATT TTGAACCCCG CTTCGGCGGG GTTTTTTGTT TTCTGTGCAT TTCGTCACCC TCCCTTCGCA
0141 ATAAACGCCC GTAATAACTC ATTGCCCCAC GGTATGA
|
