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PEC Original Annotations
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Essentiality
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Class
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essential
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References (PMID)
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|
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Deletion
|
OCR03
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
hisR
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
hisR
Search strains by all related name:
hisR b3797 ECK3790 JWR0089
|
General information (Go to Linear View: )
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|
tRNA Name
|
hisR
|
|
Alternative name
|
b3797,ECK3790,JWR0089
|
|
Location, Length
|
3,980,532 - 3,980,608
(
+
)
;
85.79
min
;
77
(bp) ,
|
|
Product
|
tRNA-His
|
|
Operon Name
|
argX-hisR-leuT-proM
|
|
Note
|
anticodon: GUG
|
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Function
|
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Gene Ontology
|
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PID
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EC number
(KEGG Pathway)
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
(database updated :
2007.02.20
)
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PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
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PSI-BLAST
|
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nr
(database updated :
2007.02.20
)
|
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BLAST
|
|
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
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PROSITE
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MMBR References
|
J Bacteriol. 1984;158(3):934-42.
Structure of an Escherichia coli tRNA operon containing linked genes for arginine, histidine, leucine, and proline tRNAs.
Hsu LM, Klee HJ, Zagorski J, Fournier MJ.
(
6327651
)
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
J Biol Chem. 1992;267:855-863
The gene encoding the biotin carboxylase subunit of Escherichia coli acetyl-CoA carboxylase.
Li, S. J., and J. E. Cronan, Jr.
|
Science. 1992;257(5071):771-8.
Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes.
Daniels DL, Plunkett G 3rd, Burland VD, Blattner FR.
(
1379743
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CCGGAGGCAG AGGTCTCAGG TTCGAATCCT
-070 GTCGGGCGCG CCATTTAGTC CCGGCGCTTG AGCTGCGGTG GTAGTAATAC CGCGTAACAA GATTTGTAGT
0001 ggtggctata gctcagttgg tagagccctg gattgtgatt ccagttgtcg tgggttcgaa tcccattagc
0071 caccccaTTA TTAGAAGTTG TGACAATGCG AAGGTGGCGG AATTGGTAGA CGCGCTAGCT TCAGGTGTTA
0141 GTGTCCTTAC GGACGTGGGG GTTCAAGTCC CCCCCCT
|
