MG1655
W3110
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tRNA Report : trpT
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)  
     Deletion OCR01,2-3 (AK4-14 / BK5-14) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  trpT
Related strains
     Strains Search Search strains by gene name:  trpT   Search strains by all related name:  trpT b3761 ECK3755 JWR0087 su7 su8 su9 supU supV

General information  (Go to Linear View:)
 tRNA Name trpT  
 Alternative name b3761,ECK3755,JWR0087,su7,su8,su9,supU,supV  
 Location, Length 3,944,980 - 3,945,055 (  +  ) ;   85.03 min ; 76 (bp) , Go to Linear View
 Product tRNA-Trp  
 Operon Name trpT  
 Note anticodon: CCA  
 Function  
 Gene Ontology  
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   3935.0  –  3960.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc trpT 

MMBR References
Microbiol. Rev. 1988;52:354-374.
Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.
Eggertsson, G., and D. Soll.
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H. ( 2184240 )
In D. Soll, J. Abelson, and P. Schimmel (ed.),Transfer RNA: biological aspects. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y. 1980:341-362
Genetics of nonsense suppressor tRNAs in Escherichia coli.
Ozeki, H., H. Inokuchi, F. Yamao, M. Kodaira, H. Sakano, T. Ikemura, and Y. Shimura.
J Biol Chem. 1979;254:12725-12731
Transcription termination in the Escherichia coli ribosomal RNA operon rrnC.
Young, R. A.
Science. 1992;257(5071):771-8.
Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes.
Daniels DL, Plunkett G 3rd, Burland VD, Blattner FR. ( 1379743 )

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             GTAAAAGAAT TCGGTGGAGC GGTAGTTCAG 
-070 TCGGTTAGAA TACCTGCCTG TCACGCAGGG GGTCGCGGGT TCGAGTCCCG TCCGTTCCGC CACCCTAATT 
0001 aggggcgtag ttcaattggt agagcaccgg tctccaaaac cgggtgttgg gagttcgagt ctctccgccc 
0071 ctgccaGAAA TCATCCTTAG CGAAAGCTAA GGATTTTTTT TATCTGAAAT AACCCTCTCC GAAGTAAATC 
0141 CTTCTACCGG CATCCTTGCC AGCCATTCAT ATTAAT