MG1655
W3110
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tRNA Report : proK
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
     Deletion 2-1 (LD)  ,  OCL10 (D)  ,  OCL10,16-3 (LD 2-1'_CRS) (D)  ,  OCL10,16-4 (LD 2-1'_P/O) (D)  ,  OCL13 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  proK
Related strains
     Strains Search Search strains by gene name:  proK   Search strains by all related name:  proK b3545 ECK3532 JWR0080 proV

General information  (Go to Linear View:)
 tRNA Name proK  
 Alternative name b3545,ECK3532,JWR0080,proV  
 Location, Length 3,706,639 - 3,706,715 (  -  ) ;   79.89 min ; 77 (bp) , Go to Linear View
 Product tRNA-Pro  
 Operon Name proK  
 Note anticodon: CGG; proline tRNA1  
 Function  
 Gene Ontology GO:0000166; nucleotide binding ( proV )
GO:0005515; protein binding ( proV )
GO:0005524; ATP binding ( proV )
GO:0005886; plasma membrane ( proV )
GO:0006810; transport ( proV )
GO:0006865; amino acid transport ( proV )
GO:0015171; amino acid transmembrane transporter activity ( proV )
GO:0016020; membrane ( proV )
GO:0016887; ATPase activity ( proV )
GO:0017111; nucleoside-triphosphatase activity ( proV )
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   3695.0  –  3720.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP proV (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc proK 

MMBR References
Microbiol. Rev. 1985;49:379-397.
Structure and organization of the transfer ribonucleic acid genes of Escherichia coli K-12.
Fournier, M. J., and H. Ozeki.
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H. ( 2184240 )
Nucleic Acids Res. 1985;13:3213-3220
Structure and transcription of the tRNA1Pro gene from Escherichia coli.
Kuchino, Y., F. Mori, and S. Nishimura.
Nucleic Acids Res. 1994;22:2576-2586
Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes.
Sofia, H. J., V. D. Burland, D. L. Daniels, G. Plunkett, and F. R. Blattner.

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             gctaactaag cggcctgctg actttctcgc 
-070 cgatcaaaag gcattttgct attaagggat tgacgagggc gtatctgcgc agtaagatgc gccccgcatt 
0001 cggtgattgg cgcagcctgg tagcgcactt cgttcgggac gaaggggtcg gaggttcgaa tcctctatca 
0071 ccgaccaaat tcgaaaagcc tgctcaacga gcaggctttt ttgcatctgc agctcatgag gatgagaacc 
0141 tccgggggca gggaggttcg actcgagcga agcgaga