MG1655
W3110
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tRNA Report : thrW
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
     Deletion DE(gpt-lac)5  ,  OCR36,37-1 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  thrW
Related strains
     Strains Search Search strains by gene name:  thrW   Search strains by all related name:  thrW b0244 ECK0245 JWR0008

General information  (Go to Linear View:)
 tRNA Name thrW  
 Alternative name b0244,ECK0245,JWR0008  
 Location, Length 262,095 - 262,170 (  +  ) ;   5.65 min ; 76 (bp) , Go to Linear View
 Product tRNA-Thr  
 Operon Name thrW  
 Note anticodon: CGU  
 Function  
 Gene Ontology  
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   250.0  –  275.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc thrW 

MMBR References
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H. ( 2184240 )
Mol Gen Genet. 1982;187(1):132-7.
Threonine tRNAs and their genes in Escherichia coli.
Comer MM. ( 6761541 )
Biochem Int. 1986;13(4):547-53.
Genes encoding threonine tRNAs with the anticodon CGU from Escherichia coli and Pseudomonas aeruginosa.
Dalrymple B, Mattick JS. ( 3099795 )

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             TGCAAAAGTA GCCATTTGAT TCACAAGGCC 
-070 ATTGACGCAT CGCCCGGTTA GTTTTAACCT TGTCCACCGT GATTCACGTT CGTGAACATG TCCTTTCAGG 
0001 gccgatatag ctcagttggt agagcagcgc attcgtaatg cgaaggtcgt aggttcgact cctattatcg 
0071 gcaccaTTAA AATCAAATTG TTACGTAAGA TCTTATCATT CTCCCACCAA AAAATTATCT TAATGTAACA 
0141 GCTGGTGTAA GTAAATTCTA TCAACGAAGA TCAATC