|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL78
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
cysT
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
cysT
Search strains by all related name:
cysT b1910 ECK1909 JWR0034
|
General information (Go to Linear View: )
|
|
tRNA Name
|
cysT
|
|
Alternative name
|
b1910,ECK1909,JWR0034
|
|
Location, Length
|
1,989,938 - 1,990,011
(
-
)
;
42.89
min
;
74
(bp) ,
|
|
Product
|
tRNA-Cys
|
|
Operon Name
|
glyW-cysT-leuZ
|
|
Note
|
anticodon: GCA
|
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Function
|
|
|
Gene Ontology
|
|
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PID
|
|
EC number
(KEGG Pathway)
|
|
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Homology Analysis
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BLAST
|
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Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
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PROSITE
|
|
PROSITE
|
|
|
MMBR References
|
Microbiol. Rev. 1985;49:379-397.
Structure and organization of the transfer ribonucleic acid genes of Escherichia coli K-12.
Fournier, M. J., and H. Ozeki.
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cttgccaagg tcggggtcgc gagttcgagt
-070 ctcgtttccc gctccagttt aaaagacatc ggcgtcaagc ggatgtctgg ctgaaaggcc tgaagaattt
0001 ggcgcgttaa caaagcggtt atgtagcgga ttgcaaatcc gtctagtccg gttcgactcc ggaacgcgcc
0071 tccactttct tcccgagccc ggatggtgga atcggtagac acaagggatt taaaatccct cggcgttcgc
0141 gctgtgcggg ttcaagtccc gctccgggta ccat
|
