|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCL88
(D)
,
OCL88-9
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
valV
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
valV
Search strains by all related name:
valV b1665 ECK1661 JWR0031
|
General information (Go to Linear View: )
|
|
tRNA Name
|
valV
|
|
Alternative name
|
b1665,ECK1661,JWR0031
|
|
Location, Length
|
1,744,459 - 1,744,535
(
+
)
;
37.60
min
;
77
(bp) ,
|
|
Product
|
tRNA-Val
|
|
Operon Name
|
valVW
|
|
Note
|
anticodon: GAC
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
|
MMBR References
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCTCTGCAAA CGGTCGAAAT AGCGCAGAAA
-070 ATTACGTTTT GCCTCTTGCC ACCTTCCCAC TCTGCCGCTA ATATTCGTCC CCGTTGTCAC CTACAACGTT
0001 gcgttcatag ctcagttggt tagagcacca ccttgacatg gtgggggtcg ttggttcgag tccaattgaa
0071 cgcaccaTCC TGCGTCCGTA GCTCAGTTGG TTAGAGCACC ACCTTGACAT GGTGGGGGTC GGTGGTTCGA
0141 GTCCACTCGG ACGCACCAGA TTTTCTTAAT CTGGTCT
|
