MG1655
W3110
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tRNA Report : tyrT
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK. ( 9729611 )
     Deletion OCR67 (D)  ,  OCR67-3 (D)  ,  OCR67-5 (D)  ,  OCR68 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  tyrT
Related strains
     Strains Search Search strains by gene name:  tyrT   Search strains by all related name:  tyrT b1231 ECK1226 JWR0029 su Su-3 Su-4 suIII supC supFsupO tyrTalpha

General information  (Go to Linear View:)
 tRNA Name tyrT  
 Alternative name b1231,ECK1226,JWR0029,su,Su-3,Su-4,suIII,supC,supFsupO,tyrTalpha  
 Location, Length 1,286,761 - 1,286,845 (  -  ) ;   27.73 min ; 85 (bp) , Go to Linear View
 Product tRNA-Tyr  
 Operon Name tyrTV-tpr  
 Note anticodon: GUA  
 Function  
 Gene Ontology  
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   1275.0  –  1300.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc tyrT 

MMBR References
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H. ( 2184240 )
Cell. 1979;16(3):523-34.
Structure and organization of the two tRNATyr gene clusters on the E. coli chromosome.
Rossi JJ, Landy A. ( 378394 )
Cell. 1981;26(3 Pt 1):305-14.
The tyrT locus: termination and processing of a complex transcript.
Rossi J, Egan J, Hudson L, Landy A. ( 7034960 )
J Bacteriol. 1993;175(23):7751-3.
Genetic map of the tyrT region of Escherichia coli from 27.1 to 27.7 minutes based exclusively on sequence data.
Bosl MR. ( 8244954 )
Nucleic Acids Res. 1991;19:5863-5870
A novel RNA product of the tyrT operon of Escherichia coli.
Bosl, M., and H. Kersten.
J Bacteriol. 1994;176:221-231
Organization and functions of genes in the upstream region of tyrT of Escherichia coli: phenotypes of mutants with partial deletion of a new gene (tgs).
Bosl, M., and H. Kersten.

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             ttcatttttc tcaacgtaac actttacagc 
-070 ggcgcgtcat ttgatatgat gcgccccgct tcccgataag ggagcaggcc agtaaaaagc attaccccgt 
0001 ggtggggttc ccgagcggcc aaagggagca gactgtaaat ctgccgtcat cgacttcgaa ggttcgaatc 
0071 cttcccccac caccataatt caccacagcg atgtggtaac ttcggtgaga ttgtgaaagt ttgcactcat 
0141 cggggaaggg tgagaacctt cgactaaggt tcgattcgag cgaaa