|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK.
(
9729611
)
|
|
|
Deletion
|
OCR67
(D)
,
OCR67-3
(D)
,
OCR67-5
(D)
,
OCR68
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
tyrV
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
tyrV
Search strains by all related name:
tyrV b1230 ECK1225 JWR0028 tyrTbeta
|
General information (Go to Linear View: )
|
|
tRNA Name
|
tyrV
|
|
Alternative name
|
b1230,ECK1225,JWR0028,tyrTbeta
|
|
Location, Length
|
1,286,467 - 1,286,551
(
-
)
;
27.73
min
;
85
(bp) ,
|
|
Product
|
tRNA-Tyr
|
|
Operon Name
|
tyrTV-tpr
|
|
Note
|
anticodon: GUA
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
|
MMBR References
|
Microbiol. Rev. 1988;52:354-374.
Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.
Eggertsson, G., and D. Soll.
|
Cell. 1979;16(3):523-34.
Structure and organization of the two tRNATyr gene clusters on the E. coli chromosome.
Rossi JJ, Landy A.
(
378394
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cgttgccaca ggcaacggcc cgaagggtga
-070 ggagcgaagc gacgaataat ccttccccca ccaccatctc aagcattacc tcaaaatttg aattacccct
0001 ggtggggttc ccgagcggcc aaagggagca gactgtaaat ctgccgtcat cgacttcgaa ggttcgaatc
0071 cttcccccac caccatcact ttcaaaagtc cctgaacttc ccaacgaatc cgcaattaaa tattctgccc
0141 atgcggggaa ggatgagaag cttcgaccaa ggttcgactc gagcg
|
