|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(pgl-grxA)502
,
OCR48,49-15
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
valZ
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
valZ
Search strains by all related name:
valZ b0746 ECK0735 JWR0021
|
General information (Go to Linear View: )
|
|
tRNA Name
|
valZ
|
|
Alternative name
|
b0746,ECK0735,JWR0021
|
|
Location, Length
|
780,291 - 780,366
(
+
)
;
16.82
min
;
76
(bp) ,
|
|
Product
|
tRNA-Val
|
|
Operon Name
|
valZ-lysY
|
|
Note
|
anticodon: UAC
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
|
MMBR References
|
Science. 1997;277:1453-1474
The complete genome sequence of Escherichia coli K-12.
Blattner, F. R., G. Plunkett, C. A. Bloch, N. T. Perna, V. Burland, M. Riley, J. Collado-Vides, J. D. Glasner, C. K. Rode, G. F. Mayhew, J. F. McGregor, N. W. Davis, H. A. Kirkpatrick, M. A. Goeden, D. J. Rose, B. Mau, and Y. Shao.
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCAACGGCCC GTAGGGCGAG CGAAGCGAGT
-070 CATCCTGCAC GACCCACCAC TAATGACGGT GGGTTCGGTG GAAGTAGTTT GTAGTATCCA GCGCAGTATC
0001 gggtgattag ctcagctggg agagcacctc ccttacaagg agggggtcgg cggttcgatc ccgtcatcac
0071 ccaccaCTCG GGTCGTTAGC TCAGTTGGTA GAGCAGTTGA CTTTTAATCA ATTGGTCGCA GGTTCGAATC
0141 CTGCACGACC CACCAGTTTT AACATCAAAC TCAGAT
|
