|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK.
(
9729611
)
|
|
|
Deletion
|
DE(pgl-grxA)502
,
OCR48,49-15
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
lysT
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
lysT
Search strains by all related name:
lysT b0743 ECK0732 JWR0018 lysTalpha sua supG supL
|
General information (Go to Linear View: )
|
|
tRNA Name
|
lysT
|
|
Alternative name
|
b0743,ECK0732,JWR0018,lysTalpha,sua,supG,supL
|
|
Location, Length
|
779,777 - 779,852
(
+
)
;
16.81
min
;
76
(bp) ,
|
|
Product
|
tRNA-Lys
|
|
Operon Name
|
lysT-valT-lysW
|
|
Note
|
anticodon: UUU
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
|
MMBR References
|
Microbiol. Rev. 1988;52:354-374.
Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.
Eggertsson, G., and D. Soll.
|
Microbiol. Rev. 1985;49:379-397.
Structure and organization of the transfer ribonucleic acid genes of Escherichia coli K-12.
Fournier, M. J., and H. Ozeki.
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
Nucleic Acids Res. 1983;11:8283-8286
supG and supL in Escherichia coli code for mutant lysine tRNAs.
Prather, N. E., B. H. Mims, and E. Murgola.
|
J Mol Biol. 1984;177(4):609-25.
Identification of transfer RNA suppressors in Escherichia coli. III. Ochre suppressors of lysine tRNA.
Yoshimura M, Kimura M, Ohno M, Inokuchi H, Ozeki H.
(
6207301
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GTGATCTACA TCGAAATTTT TGTTGCGCTC
-070 AAGTCTGAAA TCAGTAATAT ATGCCGCCGT TGCCACGGGA TATCAAACAA ACCGAAAGCA ACGAAAAAGT
0001 gggtcgttag ctcagttggt agagcagttg acttttaatc aattggtcgc aggttcgaat cctgcacgac
0071 ccaccaATCG CTAAGGTGGA AGCGGTAGTA AAACGTGAAG GATAACGTTG CATGAGCAAC GGCCCGAAGG
0141 GCGAGACGAA GTCGAGTCAT CCTGCACGAC CCACCA
|
