MG1655
W3110
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tRNA Report : lysT
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Microbiol Mol Biol Rev. 1998;62(3):814-984
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn MK. ( 9729611 )
     Deletion DE(pgl-grxA)502  ,  OCR48,49-15 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  lysT
Related strains
     Strains Search Search strains by gene name:  lysT   Search strains by all related name:  lysT b0743 ECK0732 JWR0018 lysTalpha sua supG supL

General information  (Go to Linear View:)
 tRNA Name lysT  
 Alternative name b0743,ECK0732,JWR0018,lysTalpha,sua,supG,supL  
 Location, Length 779,777 - 779,852 (  +  ) ;   16.81 min ; 76 (bp) , Go to Linear View
 Product tRNA-Lys  
 Operon Name lysT-valT-lysW  
 Note anticodon: UUU  
 Function  
 Gene Ontology  
 PID  
 EC number
  (KEGG Pathway)
 
 

 Linear View (Whole Mode)
View Location
   770.0  –  795.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
        BLAST  
        PSI-BLAST
    nr     (database updated : 2007.02.20 )
        BLAST  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE  

Other Cross-Reference
    EcoCyc lysT 

MMBR References
Microbiol. Rev. 1988;52:354-374.
Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.
Eggertsson, G., and D. Soll.
Microbiol. Rev. 1985;49:379-397.
Structure and organization of the transfer ribonucleic acid genes of Escherichia coli K-12.
Fournier, M. J., and H. Ozeki.
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H. ( 2184240 )
Nucleic Acids Res. 1983;11:8283-8286
supG and supL in Escherichia coli code for mutant lysine tRNAs.
Prather, N. E., B. H. Mims, and E. Murgola.
J Mol Biol. 1984;177(4):609-25.
Identification of transfer RNA suppressors in Escherichia coli. III. Ochre suppressors of lysine tRNA.
Yoshimura M, Kimura M, Ohno M, Inokuchi H, Ozeki H. ( 6207301 )

Sequences
Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             GTGATCTACA TCGAAATTTT TGTTGCGCTC 
-070 AAGTCTGAAA TCAGTAATAT ATGCCGCCGT TGCCACGGGA TATCAAACAA ACCGAAAGCA ACGAAAAAGT 
0001 gggtcgttag ctcagttggt agagcagttg acttttaatc aattggtcgc aggttcgaat cctgcacgac 
0071 ccaccaATCG CTAAGGTGGA AGCGGTAGTA AAACGTGAAG GATAACGTTG CATGAGCAAC GGCCCGAAGG 
0141 GCGAGACGAA GTCGAGTCAT CCTGCACGAC CCACCA