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PEC Original Annotations
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Essentiality
|
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Class
|
essential
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References (PMID)
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Deletion
|
OCR47-14 (BK5-3 / AK4-3-27)
(D)
,
OCR47-15 (BK5-3 / AK4-3-29)
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
leuW
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Related strains
|
|
Strains Search
|
Search strains by gene name:
leuW
Search strains by all related name:
leuW b0672 ECK0660 feeB JWR0016 o50
|
General information (Go to Linear View: )
|
|
tRNA Name
|
leuW
|
|
Alternative name
|
b0672,ECK0660,feeB,JWR0016,o50
|
|
Location, Length
|
696,186 - 696,270
(
-
)
;
15.01
min
;
85
(bp) ,
|
|
Product
|
tRNA-Leu
|
|
Operon Name
|
metT-leuW-glnUW-metU-glnVX
|
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Note
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anticodon: CAA
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Function
|
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Gene Ontology
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PID
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EC number
(KEGG Pathway)
|
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
(database updated :
2007.02.20
)
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PSI-BLAST
|
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SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
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PSI-BLAST
|
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nr
(database updated :
2007.02.20
)
|
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BLAST
|
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
|
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PROSITE
|
MYRISTYL
|
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MMBR References
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
Cell. 1981;23(1):239-49.
Organization and structure of an E. coli tRNA operon containing seven tRNA genes.
Nakajima N, Ozeki H, Shimura Y.
(
6163550
)
|
J Biol Chem. 1982;257:11113-11120
In vitro transcription of the supB-E tRNA operon of Escherichia coli.
Nakajima, N., H. Ozeki, and Y. Shimura.
|
Mol Gen Genet. 1987;209(3):618-20.
Organisation of the Escherichia coli chromosome between genes glnS and glnU, V.
Plumbridge J.
(
2828887
)
|
Mol Microbiol. 1996;20(4):853-65.
Characterization of an Escherichia coli mutant, feeA, displaying resistance to the calmodulin inhibitor 48/80 and reduced expression of the rare tRNA3Leu.
Bouquin N, Chen MX, Kim S, Vannier F, Bernard S, Holland IB, Seror SJ.
(
8793881
)
|
EMBO J. 1991;10:3113-3122
A single base change in the acceptor stem of tRNA3Leu confers resistance upon Escherichia coli to the calmodulin inhibitor, 48/80.
Chen, M. X., N. Bouquin, V. Norris, S. Casaregola, S. J. Seror, and I. B. Holland.
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gcgaaaaaaa agatggctac gtagctcagt
-070 tggttagagc acatcactca taatgatggg gtcacaggtt cgaatcccgt cgtagccacc atcttttttt
0001 gcgggagtgg cgaaattggt agacgcacca gatttaggtt ctggcgccgc aaggtgtgcg agttcaagtc
0071 tcgcctcccg caccattcac cagaaagcgt tgtacggatg gggtatcgcc aagcggtaag gcaccggttt
0141 ttgataccgg cattccctgg ttcgaatcca ggtaccccag ccatc
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