|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
9-1
(LD)
,
DE(gpt-lac)5
,
DE(argF-lac)169
,
OCR36,37-6 (LD 9C::Ap)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ptwF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ptwF
Search strains by all related name:
ptwF b4629 ECK4462
|
General information (Go to Linear View: )
|
|
tRNA Name
|
ptwF
|
|
Alternative name
|
b4629,ECK4462
|
|
Location, Length
|
296,430 - 296,478
(
+
)
;
6.39
min
;
49
(bp) ,
|
|
Product
|
tRNA-OTHER
|
|
Operon Name
|
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TTAATTTCAA TCAACGGGTT TATTGCTATA
-070 ACTTGGTGTT TTATAATATA AAGTATGTTG TTTTGATTGA TTGCTCAAGT AGTTAAAAAT GCATTAACAT
0001 cgcattcgta atgcgaaggt cgtaggttcg actcctatta tcggcaccaT TAAAATCAAA GAGTTACCCC
0071 ATATTTAAAT ACACCACGTT TCCTCCTGTG CCGTATTTGT GCCATTGTAA CCTTGGCAAT TCATCAAAAT
0141 ACTGTTCTG
|
