|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
17
(LD)
,
OCR57,60-3 (LD 17C_CRS)
(D)
,
OCR57,60-4 (LD 17C_P/O)
(D)
,
OCR58
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
cbpA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
cbpA
Search strains by all related name:
cbpA b1000 ECK0991 f306 JW0985
|
General information (Go to Linear View: )
|
|
Gene Name
|
cbpA
|
|
Alternative name
|
b1000,ECK0991,f306,JW0985
|
|
Location, Length
|
1,062,078 - 1,062,998
(
-
)
;
22.89
min
;
921
(bp) ,
306
(aa)
|
|
Product
|
curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK
|
|
Operon Name
|
cbpAM
|
|
Note
|
curved DNA-binding protein; functions closely related to DnaJ; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding
|
|
Function
|
factor; Chaperones
|
|
Gene Ontology
|
GO:0003677
;
DNA binding ( cbpA )
GO:0003681
;
bent DNA binding ( cbpA )
GO:0005737
;
cytoplasm ( cbpA )
GO:0006457
;
protein folding ( cbpA )
GO:0031072
;
heat shock protein binding ( cbpA )
GO:0051082
;
unfolded protein binding ( cbpA )
|
|
PID
|
1787235
|
EC number
(KEGG Pathway)
|
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
cbpA
(
EG12193
)
|
|
Number of removed
|
0 aa cleaved
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
CBPA_ECOLI
(
P36659
;
P77250
)
|
|
- Protein name
|
Curved DNA-binding protein.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=cbpA; OrderedLocusNames=b1000;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
cbpA
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, The Crystal Structure Of Hsp40 Ydj1
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Curved DNA-binding protein
|
|
PSI-BLAST
|
Chaperone protein dnaJ
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
MICROBODIES_CTER
DNAJ_1
|
|
MMBR References
|
Proc Natl Acad Sci U S A. 1994;91:1054-1058
An analogue of the DnaJ molecular chaperone in Escherichia coli.
Ueguchi, C., M. Kakeda, H. Yamada, and T. Mizuno.
|
| Sequences |
Amino acid
FASTA format
|
0001 MELKDYYAIM GVKPTDDLKT IKTAYRRLAR KYHPDVSKEP DAEARFKEVA EAWEVLSDEQ RRAEYDQMWQ
0071 HRNDPQFNRQ FHHGDGQSFN AEDFDDIFSS IFGQHARQSR QRPATRGHDI EIEVAVFLEE TLTEHKRTIS
0141 YNLPVYNAFG MIEQEIPKTL NVKIPAGVGN GQRIRLKGQG TPGENGGPNG DLWLVIHIAP HPLFDIVGQD
0211 LEIVVPVSPW EAALGAKVTV PTLKESILLT IPPGSQAGQR LRVKGKGLVS KKQTGDLYAV LKIVMPPKPD
0281 ENTAALWQQL ADAQSSFDPR KDWGKA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttctgtgttg gcatatgaaa ttttgaggat
-070 taccctacac ttataggagt taccttacag gggttccttc aatttgtgtt gatttacgcg agataacgct
0001 atggaattaa aggattatta cgccatcatg ggcgtgaaac cgacggacga tctcaagaca atcaagaccg
0071 cctatcgtcg acttgcccgc aaataccatc ctgatgtcag caaagaaccg gatgccgaag cccgcttcaa
0141 agaggtcgct gaagcctggg aagtgttaag tgatgaacaa cgtcgcgctg agtatgatca gatgtggcaa
0211 catcgcaacg atccgcaatt taaccgtcag ttccaccatg gcgacggtca gagttttaac gccgaagatt
0281 ttgacgatat cttctcgtca attttcggtc agcatgcccg ccagagccgt caacgccccg ccacacgcgg
0351 ccacgatatt gaaatcgaag tggcggtatt cctcgaagaa acgcttactg agcataagcg taccatcagc
0421 tataacctgc cggtttataa cgcctttggc atgatcgaac aggaaattcc gaaaacgctg aatgtgaaga
0491 tcccggcggg cgtcggcaat ggtcaacgca tccgtctgaa aggccagggg acgccgggcg aaaacggcgg
0561 tccaaatggc gatttgtggc tggtgattca tattgcgcca catccgctgt ttgatattgt cggccaggat
0631 ctggaaattg tggtgccggt tagcccgtgg gaagcggcgc tgggtgctaa agtcaccgtt ccaacactga
0701 aagaaagcat tttgctgact atcccgccag gcagccaggc cgggcaacga ttgcgcgtta aaggcaaagg
0771 tctggtgagc aaaaaacaga ccggcgatct gtatgcggta ctgaaaatcg tgatgccgcc gaaaccggat
0841 gaaaacactg ccgcgctgtg gcagcaactg gcagacgccc agtcgtcttt tgatccacgt aaagattggg
0911 ggaaagcata atggctaatg ttacggtgac ttttactatt accgaatttt gcctgcatac cggcatctct
0981 gaagaggagt tgaatgaaat tgtcggtttg ggggtggttg a
|
