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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Microbiology. 1998;144 (Pt 12):3297-308.
A factor produced by Escherichia coli K-12 inhibits the growth of E. coli mutants defective in the cytochrome bd quinol oxidase complex: enterochelin rediscovered.
Cook GM, Loder C, Soballe B, Stafford GP, Membrillo-Hernandez J, Poole RK.
(
9884221
)
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Deletion
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OCR50
(D)
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Related gene (W3110 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
cydC
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Related strains
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Strains Search
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Search strains by gene name:
cydC
Search strains by all related name:
cydC b0886 ECK0877 JW0869 mdrA mdrH surB ycaB
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General information (Go to Linear View: )
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Gene Name
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cydC
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Alternative name
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b0886,ECK0877,JW0869,mdrA,mdrH,surB,ycaB
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Location, Length
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926,697 - 928,418
(
-
)
;
19.97
min
;
1722
(bp) ,
573
(aa)
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Product
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fused glutathione, cysteine exporter subunits ofABC superfamily: membrane component/ATP-binding component
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Operon Name
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cydDC
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Note
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ATP-binding component of cytochrome-related transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
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Function
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transport; Transport of small molecules: Other
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Gene Ontology
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GO:0000166
;
nucleotide binding ( cydC )
GO:0005524
;
ATP binding ( cydC )
GO:0005886
;
plasma membrane ( cydC )
GO:0006810
;
transport ( cydC )
GO:0016020
;
membrane ( cydC )
GO:0016021
;
integral to membrane ( cydC )
GO:0016887
;
ATPase activity ( cydC )
GO:0017111
;
nucleoside-triphosphatase activity ( cydC )
GO:0042626
;
ATPase activity, coupled to transmembrane movement of substances ( cydC )
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PID
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1787112
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
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CYDC_ECOLI
(
P23886
)
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- Protein name
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Transport ATP-binding protein cydC.
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- Synonyms
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- Gene name
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Name=cydC; Synonyms=mdrA, mdrH, surB; OrderedLocusNames=b0886;
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MMBR References
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J Bacteriol. 1992;174(11):3824-5.
Physical map locations of the trxB, htrD, cydC, and cydD genes of Escherichia coli.
Delaney JM, Georgopoulos C.
(
1317384
)
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J Bacteriol. 1987;169(5):2107-12.
Identification of the cydC locus required for expression of the functional form of the cytochrome d terminal oxidase complex in Escherichia coli.
Georgiou CD, Fang H, Gennis RB.
(
3032907
)
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J Bacteriol. 1996;178:6348-6351
The temperature-sensitive growth and survival phenotypes of Escherichia coli cydDC and cydAB strains are due to deficiencies in cytochrome bd and are corrected by exogenous catalase and reducing agents.
Goldman, B. S., K. K. Gabbert, and R. G. Kranz.
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Trends Genet. 1996;12(4):156-7.
Escherichia coli K-12 on the internet.
Rudd KE.
(
8901421
)
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J Bacteriol. 1996;178:6091-6096
The stationary-phase-exit defect of cydC (surB) mutants is due to the lack of a functional terminal cytochrome oxidase.
Siegele, D. A., K. R. Imlay, and J. A. Imlay.
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Genes Dev. 1993;7:2629-2640
Isolation and characterization of an Escherichia coli mutant defective in resuming growth after starvation.
Siegele, D. A., and R. Kolter.
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| Sequences |
Amino acid
FASTA format
|
0001 MRALLPYLAL YKRHKWMLSL GIVLAIVTLL ASIGLLTLSG WFLSASAVAG VAGLYSFNYM LPAAGVRGAA
0071 ITRTAGRYFE RLVSHDATFR VLQHLRIYTF SKLLPLSPAG LARYRQGELL NRVVADVDTL DHLYLRVISP
0141 LVGAFVVIMV VTIGLSFLDF TLAFTLGGIM LLTLFLMPPL FYRAGKSTGQ NLTHLRGQYR QQLTAWLQGQ
0211 AELTIFGASD RYRTQLENTE IQWLEAQRRQ SELTALSQAI MLLIGALAVI LMLWMASGGV GGNAQPGALI
0281 ALFVFCALAA FEALAPVTGA FQHLGQVIAS AVRISDLTDQ KPEVTFPDTQ TRVADRVSLT LRDVQFTYPE
0351 QSQQALKGIS LQVNAGEHIA ILGRTGCGKS TLLQQLTRAW DPQQGEILLN DSPIASLNEA ALRQTISVVP
0421 QRVHLFSATL RDNLLLASPG SSDEALSEIL RRVGLEKLLE DAGLNSWLGE GGRQLSGGEL RRLAIARALL
0491 HDAPLVLLDE PTEGLDATTE SQILELLAEM MREKTVLMVT HRLRGLSRFQ QIIVMDNGQI IEQGTHAELL
0561 ARQGRYYQFK QGL
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gcaggatggc cggattattg agcaaggacg
-070 ttacgcggaa ttaagtgtgg ctggtggccc attcgccaca ttactggccc atcgtcagga ggagatttaa
0001 atgcgcgctt tgctacccta tctggcactg tataaacgtc ataaatggat gttaagtctt ggtattgtgc
0071 tggcaattgt gacgctgctc gccagtatcg gtctgttgac actttccggc tggttcctct cggcctcagc
0141 ggttgcgggg gttgccggac tgtacagctt caactatatg ctacccgctg cgggcgtgcg tggcgcagca
0211 atcacccgta ctgccgggcg ctattttgaa cgtctggtaa gtcacgacgc gactttccgc gtgttgcagc
0281 atctgcgcat ttacaccttc agcaaattgc tgcccctctc ccctgccgga ctggcgcgct atcgtcaggg
0351 cgaattgctc aatcgcgtgg tggcggatgt tgatacgctc gatcatcttt acctgcgcgt tatctcgccg
0421 ctggtgggcg cttttgtggt gattatggtg gtgacaatcg ggttaagttt ccttgatttc accctcgcct
0491 ttacgctggg cggcattatg ttactgacgc ttttcctgat gccaccgctg ttttatcgtg cgggaaaaag
0561 caccgggcaa aatctgactc atcttcgcgg acagtatcgc caacaactga cggcctggct gcaagggcaa
0631 gctgagctga ccatttttgg tgccagcgat cgttatcgca cgcaactaga gaatacagaa attcaatggc
0701 tggaagcgca acgccgtcaa tctgaactga ccgcattgtc gcaagcgata atgctgctca ttggcgcgtt
0771 agcggtgatc ctgatgctgt ggatggcgtc tggcggcgtt ggcggcaatg ctcaacccgg cgcgttaatt
0841 gccctgtttg tcttctgcgc gttagccgcg tttgaagcac tggcaccagt aacgggtgca tttcagcatc
0911 tggggcaagt cattgcctct gccgtacgta tctctgactt aacggatcaa aaaccggagg tcacctttcc
0981 tgatacccaa actcgtgttg ccgatcgcgt ttcgctgacg ttacgggatg ttcagttcac ttatccggag
1051 caatctcaac aggcacttaa agggatttct cttcaggtaa acgccgggga acatatagcg attctcgggc
1121 gaaccggatg cggcaaatca acactgttac aacagctgac ccgcgcatgg gacccgcaac agggcgagat
1191 tttgcttaac gatagcccca tagccagcct gaatgaagcg gctctacgac agaccatcag cgttgttcct
1261 cagcgagtgc atctgtttag cgccacgctg cgtgataatc ttttactcgc ctcgcctggc agtagtgatg
1331 aggctctgtc ggagatcttg cgtcgcgttg gcctggaaaa gctgctcgag gatgcaggtc tcaacagttg
1401 gttaggtgaa ggcggacgcc agctctccgg tggtgaactg cgccgtctgg ctatcgcccg tgcgctgtta
1471 catgatgcgc cactggtgtt gctggatgaa cctaccgaag gcttagatgc cacaaccgaa agccagatcc
1541 ttgaattgct tgcagaaatg atgcgtgaga aaacggtgtt aatggtcacc catcgacttc gcggactctc
1611 tcgtttccaa caaataatag tgatggacaa cgggcaaatt attgagcaag gtactcacgc agaactgctt
1681 gccagacagg ggcgttatta ccagttcaag cagggtttgt aagctattat tgaacgatcc gacttgcgtg
1751 gagttttgcg gtcatgcgcc tggttcagct ttctcgccat tcaatagcct tcccttcccc ggaaggcgca
1821 tt
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