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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
|
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Deletion
|
OCR30,31-3 (BK2-1 / AK1-1)
(D)
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Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
rsmH
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
rsmH
Search strains by all related name:
rsmH b0082 ECK0083 JW0080 mraW yabC
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General information (Go to Linear View: )
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Gene Name
|
rsmH
|
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Alternative name
|
b0082,ECK0083,JW0080,mraW,yabC
|
|
Location, Length
|
90,094 - 91,035
(
+
)
;
1.94
min
;
942
(bp) ,
313
(aa)
|
|
Product
|
16S rRNA m(4)C1402 methyltransferase, SAM-dependent
|
|
Operon Name
|
mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC
|
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Note
|
putative apolipoprotein; GO_process: GO:0042158 - lipoprotein biosynthetic process
|
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Function
|
enzyme; rRNA modification
|
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Gene Ontology
|
GO:0005515
;
protein binding ( mraW )
GO:0005737
;
cytoplasm ( mraW )
GO:0008168
;
methyltransferase activity ( mraW )
GO:0016740
;
transferase activity ( mraW )
|
|
PID
|
1786270
|
EC number
(KEGG Pathway)
|
2.1.1.-
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
mraW
(
EG11085
)
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Number of removed
|
0 aa cleaved
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
MRAW_ECOLI
(
P60390
;
P18595
)
|
|
- Protein name
|
S-adenosyl-methyltransferase mraW
|
|
- Synonyms
|
EC 2.1.1.-
|
|
- Gene name
|
Name=mraW; OrderedLocusNames=b0082;
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Homology Analysis
|
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BLAST
|
|
Bacteria
|
|
GTOP
|
mraW
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of A Predicted S-Adenosylmethionine- Dependent Methyltransferase Tt1512 From Thermus Thermophilus Hb8.
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
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BLAST
|
S-adenosyl-methyltransferase mraW
|
|
PSI-BLAST
|
S-adenosyl-methyltransferase mraW
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
S-adenosyl-methyltransferase [Escherichia coli APEC O1]
|
|
Pfam 28.0
(database updated :
2015-05
)
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Pfam
|
|
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PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MMENYKHTTV LLDEAVNGLN IRPDGIYIDG TFGRGGHSRL ILSQLGEEGR LLAIDRDPQA IAVAKTIDDP
0071 RFSIIHGPFS ALGEYVAERD LIGKIDGILL DLGVSSPQLD DAERGFSFMR DGPLDMRMDP TRGQSAAEWL
0141 QTAEEADIAW VLKTYGEERF AKRIARAIVE RNREQPMTRT KELAEVVAAA TPVKDKFKHP ATRTFQAVRI
0211 WVNSELEEIE QALKSSLNVL APGGRLSIIS FHSLEDRIVK RFMRENSRGP QVPAGLPMTE EQLKKLGGRQ
0281 LRALGKLMPG EEEVAENPRA RSSVLRIAER TNA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GATGAAACAA CCTGGCATCA ACAGGTCAAG
-070 GAAGATATCG ACGCAGAGCA GTTGGCTACC GGAGACTTAT CGGAGCGACT GCAGGACTTG TCTCTATAAA
0001 atgatggaaa actataaaca tactacggtg ctgctggatg aagccgttaa tggcctcaat atccgtcctg
0071 atggcatcta cattgatggg acttttggtc gcggtggtca ctcacgtctg atcctctcgc agcttggcga
0141 agaggggcgt ttgctggcga tcgatcgcga cccgcaggct atcgccgttg cgaagactat tgatgatccg
0211 cgcttctcca tcatccacgg acctttctcc gcgctgggcg aatacgttgc cgagcgcgat cttatcggca
0281 agatcgacgg cattctcctc gatcttggcg tctcttcacc gcaacttgat gatgctgaac gtggcttttc
0351 ctttatgcgc gatggtccgc tggacatgcg tatggaccca acccgtgggc agtcagccgc tgaatggcta
0421 caaaccgcag aagaagccga tatcgcctgg gtattgaaaa cctatggtga agagcgtttt gccaaacgca
0491 ttgcccgcgc cattgtcgag cgtaaccgcg aacagccgat gacccgcacc aaagaactgg cggaagtcgt
0561 ggctgctgca acgccggtga aagataagtt taaacatccc gcgacccgta ccttccaggc ggtgcgcatt
0631 tgggtaaaca gtgaactgga ggagatagag caggcgctaa aaagctcgct caacgtgctg gccccgggtg
0701 ggcggctttc gatcatcagc ttccactcgc tggaagaccg tattgtgaaa cgttttatgc gtgaaaacag
0771 ccgcggtccg caagttccgg cagggttacc gatgactgaa gagcagctca aaaaactggg tggccgtcag
0841 ctgcgagcac taggcaagtt aatgccgggc gaagaagagg tggctgagaa ccctcgtgcc cgtagttcag
0911 ttctgcgtat tgcagagagg acgaatgcat gaTCAGCAGA GTGACAGAAG CTCTAAGCAA AGTTAAAGGA
0981 TCGATGGGAA GCCACGAGCG CCATGCATTG CCTGGTGTTA TCGGTGACGA TCTTTTGCGA TT
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