MG1655
W3110
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Gene Report : ybiV
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion 15 (LD)  ,  DE(pgl-grxA)502  ,  DE(glnP-moeA)454  ,  15+dps (LD)  ,  OCR48,50-8 (LD 15D::Cm) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  ybiV
Related strains
     Strains Search Search strains by gene name:  ybiV   Search strains by all related name:  ybiV b0822 ECK0812 f271 f271b JW0806 supH

General information  (Go to Linear View:)
 Gene Name ybiV  
 Alternative name b0822,ECK0812,f271,f271b,JW0806,supH  
 Location, Length 858,436 - 859,251 (  -  ) ;   18.50 min ; 816 (bp) ,   271 (aa) Go to Linear View
 Product sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P  
 Operon Name ybiV  
 Note  
 Function  
 Gene Ontology GO:0000287 ; magnesium ion binding ( supH )
GO:0003824 ; catalytic activity ( supH )
GO:0008152 ; metabolic process ( supH )
GO:0016787 ; hydrolase activity ( supH )
GO:0046872 ; metal ion binding ( supH )
GO:0050308 ; sugar-phosphatase activity ( supH )
 PID 1787043  
 EC number
  (KEGG Pathway)
 
 
SWISS-PROT  ( Show details [ 1 more] )
  botton Entry name(Acc.no) YIDA_ECOLI ( P09997 ; P76737 )
    -  Protein name Hypothetical protein yidA.  
    -  Synonyms  
    -  Gene name Name=yidA; OrderedLocusNames=b3697, c4619, SF3767, S4004;  

 Linear View (Whole Mode)
View Location
   850.0  –  875.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP ybiV (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Crystal Structure Of Ybiv From Escherichia Coli K12  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Sugar phosphatase supH  
         PSI-BLAST Sarcoplasmic/endoplasmic reticulum calcium ATPase 3
    nr     (database updated : 2007.02.20 )
         BLAST predicted hydrolase [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE GLYCOSAMINOGLYCAN    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL    COF_2     

Other Cross-Reference
    COG COG0561R 
    EcoCyc ybiV 

Sequences
Amino acid
FASTA format
0001 MSVKVIVTDM DGTFLNDAKT YNQPRFMAQY QELKKRGIKF VVASGNQYYQ LISFFPELKD EISFVAENGA 
0071 LVYEHGKQLF HGELTRHESR IVIGELLKDK QLNFVACGLQ SAYVSENAPE AFVALMAKHY HRLKPVKDYQ 
0141 EIDDVLFKFS LNLPDEQIPL VIDKLHVALD GIMKPVTSGF GFIDLIIPGL HKANGISRLL KRWDLSPQNV 
0211 VAIGDSGNDA EMLKMARYSF AMGNAAENIK QIARYATDDN NHEGALNVIQ AVLDNTSPFN S

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             catcaatttc atccttactt tcattcgaaa 
-070 tataatttgt gctctgcgtc acattgttat tacactgtta cggtttcatt ttcgagccag gagcacacct 
0001 atgagcgtaa aagttatcgt cacagacatg gacggtactt ttcttaacga cgccaaaacg tacaaccaac 
0071 cacgttttat ggcgcaatat caggaactga aaaagcgcgg cattaagttc gttgttgcca gcggtaatca 
0141 gtattaccag cttatttcat tctttcctga gctaaaggat gagatctctt ttgtcgcgga aaacggcgca 
0211 ctggtttacg aacatggcaa gcagttgttc cacggcgaac tgacccgaca tgaatcgcgg attgttattg 
0281 gcgagttgct aaaagataag caactcaatt ttgtcgcctg cggtctgcaa agtgcatatg tcagcgaaaa 
0351 tgcccccgaa gcatttgtcg cactgatggc aaaacactac catcgcctga aacctgtaaa agattatcag 
0421 gagattgacg acgtactgtt caagttttcg ctcaacctgc cggatgaaca aatcccgtta gtgatcgaca 
0491 aactgcacgt agcgctcgat ggcattatga aacccgttac cagtggtttt ggctttatcg acctgattat 
0561 tcccggtcta cataaagcaa acggtatttc gcggttactg aaacgctggg atctgtcacc gcaaaatgtg 
0631 gtagcgattg gcgacagcgg taacgatgcg gagatgctga aaatggcgcg ttattccttt gcgatgggca 
0701 atgctgcgga aaacattaaa caaatcgccc gttacgctac cgatgataat aatcatgaag gcgcgctgaa 
0771 tgtgattcag gcggtgctgg ataacacatc cccttttaac agctgacctc tctaccggag ccgtgcgctc 
0841 cggttttccc ttctttttac atcctgtaca tcacatcaaa tcattaaact tgcattaact tatttataac 
0911 ttatat