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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
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DE(pgl-grxA)502
,
OCR48,49-12
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
sdhB
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Related strains
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Strains Search
|
Search strains by gene name:
sdhB
Search strains by all related name:
sdhB b0724 ECK0713 JW0714
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General information (Go to Linear View: )
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Gene Name
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sdhB
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Alternative name
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b0724,ECK0713,JW0714
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Location, Length
|
756,912 - 757,628
(
+
)
;
16.31
min
;
717
(bp) ,
238
(aa)
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Product
|
succinate dehydrogenase, FeS subunit
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Operon Name
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sdhCDAB-sucABCD
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Note
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succinate dehydrogenase, iron sulfur protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009060 - aerobic respiration
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Function
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enzyme; Energy metabolism, carbon: TCA cycle
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Gene Ontology
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GO:0000104
;
succinate dehydrogenase activity ( sdhB )
GO:0005506
;
iron ion binding ( sdhB )
GO:0005515
;
protein binding ( sdhB )
GO:0005886
;
plasma membrane ( sdhB )
GO:0006099
;
tricarboxylic acid cycle ( sdhB )
GO:0006118
;
electron transport ( sdhB )
GO:0006810
;
transport ( sdhB )
GO:0009055
;
electron carrier activity ( sdhB )
GO:0016020
;
membrane ( sdhB )
GO:0016491
;
oxidoreductase activity ( sdhB )
GO:0046872
;
metal ion binding ( sdhB )
GO:0051536
;
iron-sulfur cluster binding ( sdhB )
GO:0051537
;
2 iron, 2 sulfur cluster binding ( sdhB )
GO:0051538
;
3 iron, 4 sulfur cluster binding ( sdhB )
GO:0051539
;
4 iron, 4 sulfur cluster binding ( sdhB )
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PID
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1786943
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EC number
(KEGG Pathway)
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1.3.99.1
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
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EcoGene
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sdhB
(
EG10932
)
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Number of removed
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0 aa cleaved
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
|
DHSB_ECOLI
(
P07014
)
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- Protein name
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Succinate dehydrogenase iron-sulfur protein
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- Synonyms
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EC 1.3.99.1
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- Gene name
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Name=sdhB; OrderedLocusNames=b0724;
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MMBR References
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Mol Microbiol. 1995;15(3):473-82.
Regulation of succinate dehydrogenase (sdhCDAB) operon expression in Escherichia coli in response to carbon supply and anaerobiosis: role of ArcA and Fnr.
Park SJ, Tseng CP, Gunsalus RP.
(
7783618
)
|
J Gen Microbiol. 1986;132(12):3239-51.
Transcript analysis of the citrate synthase and succinate dehydrogenase genes of Escherichia coli K12.
Wilde RJ, Guest JR.
(
3309132
)
|
Biochem J. 1984;222(2):519-34.
Nucleotide sequence encoding the flavoprotein and hydrophobic subunits of the succinate dehydrogenase of Escherichia coli.
Wood D, Darlison MG, Wilde RJ, Guest JR.
(
6383359
)
|
J Bacteriol. 1991;173(5):1569-70.
E. coli map. Physical map locations of genes encoding components of the aerobic respiratory chain of Escherichia coli.
Calhoun MW, Newton G, Gennis RB.
(
1847904
)
|
Biochem J. 1984;223(2):507-17.
Nucleotide sequence encoding the iron-sulphur protein subunit of the succinate dehydrogenase of Escherichia coli.
Darlison MG, Guest JR.
(
6388571
)
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| Sequences |
Amino acid
FASTA format
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0001 MRLEFSIYRY NPDVDDAPRM QDYTLEADEG RDMMLLDALI QLKEKDPSLS FRRSCREGVC GSDGLNMNGK
0071 NGLACITPIS ALNQPGKKIV IRPLPGLPVI RDLVVDMGQF YAQYEKIKPY LLNNGQNPPA REHLQMPEQR
0141 EKLDGLYECI LCACCSTSCP SFWWNPDKFI GPAGLLAAYR FLIDSRDTET DSRLDGLSDA FSVFRCHSIM
0211 NCVSVCPKGL NPTRAIGHIK SMLLQRNA
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AGAGTCGGAA TCCATGACGC GCCGAAGCGT
-070 CAACATGGAA CCGAAACTGC GCCCGGCATT CCCGCCGAAG ATTCGTACTT ACTAATGCGG AGACAGGAAA
0001 atgagactcg agttttcaat ttatcgctat aacccggatg ttgatgatgc tccgcgtatg caggattaca
0071 ccctggaagc ggatgaaggt cgcgacatga tgctgctgga tgcgcttatc cagctaaaag agaaagatcc
0141 cagcctgtcg ttccgccgct cctgccgtga aggtgtgtgc ggttccgacg gtctgaacat gaacggcaag
0211 aatggtctgg cctgtattac cccgatttcg gcactcaacc agccgggcaa gaagattgtg attcgcccgc
0281 tgccaggttt accggtgatc cgcgatttgg tggtagacat gggacaattc tatgcgcaat atgagaaaat
0351 taagccttac ctgttgaata atggacaaaa tccgccagct cgcgagcatt tacagatgcc agagcagcgc
0421 gaaaaactcg acgggctgta tgaatgtatt ctctgcgcat gttgttcaac ctcttgtccg tctttctggt
0491 ggaatcccga taagtttatc ggcccggcag gcttgttagc ggcatatcgt ttcctgattg atagccgtga
0561 taccgagact gacagccgcc tcgacggttt gagtgatgca ttcagcgtat tccgctgtca cagcatcatg
0631 aactgcgtca gtgtatgtcc gaaggggctg aacccgacgc gcgccatcgg ccatatcaag tcgatgttgt
0701 tgcaacgtaa tgcgtaaACC GTAGGCCTGA TAAGACGCGC AAGCGTCGCA TCAGGCAACC AGTGCCGGAT
0771 GCGGCGTGAA CGCCTTATCC GGCCTACAAG TCATTACCCG TAGGCCT
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