MG1655
W3110
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Gene Report : lptE
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
     Deletion OCR46-11 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  lptE
Related strains
     Strains Search Search strains by gene name:  lptE   Search strains by all related name:  lptE b0641 ECK0634 JW0636 rlpB

General information  (Go to Linear View:)
 Gene Name lptE  
 Alternative name b0641,ECK0634,JW0636,rlpB  
 Location, Length 670,828 - 671,409 (  -  ) ;   14.46 min ; 582 (bp) ,   193 (aa) Go to Linear View
 Product LPS assembly OM complex LptDE, lipoprotein component  
 Operon Name leuS-lptE-holA-nadD-cobC  
 Note a minor lipoprotein; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042158 - lipoprotein biosynthetic process  
 Function membrane; Macromolecule synthesis, modification: Lipoprotein  
 Gene Ontology GO:0005515; protein binding ( rlpB )
GO:0009279; cell outer membrane ( rlpB )
GO:0016020; membrane ( rlpB )
GO:0019867; outer membrane ( rlpB )
GO:0043165; outer membrane biogenesis (sensu Proteobacteria) ( rlpB )
 PID 1786860  
 EC number
  (KEGG Pathway)
 
 
SWISS-PROT  ( Show details [ 1 more] )
  botton Entry name(Acc.no) RLPB_ECOLI ( P10101 ; P77576 )
    -  Protein name Rare lipoprotein B precursor.  
    -  Synonyms  
    -  Gene name Name=rlpB; OrderedLocusNames=b0641, c0732;  

 Linear View (Whole Mode)
View Location
   660.0  –  685.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP rlpB (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Rare lipoprotein B precursor  
         PSI-BLAST Rare lipoprotein B precursor
    nr     (database updated : 2007.02.20 )
         BLAST minor lipoprotein [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    PROKAR_LIPOPROTEIN     

Other Cross-Reference
    EcoCyc lptE 

MMBR References
J Bacteriol. 1987;169(12):5692-9.
Genes encoding two lipoproteins in the leuS-dacA region of the Escherichia coli chromosome.
Takase I, Ishino F, Wachi M, Kamata H, Doi M, Asoh S, Matsuzawa H, Ohta T, Matsuhashi M. ( 3316191 )

Sequences
Amino acid
FASTA format
0001 MRYLATLLLS LAVLITAGCG WHLRDTTQVP STMKVMILDS GDPNGPLSRA VRNQLRLNGV ELLDKETTRK 
0071 DVPSLRLGKV SIAKDTASVF RNGQTAEYQM IMTVNATVLI PGRDIYPISA KVFRSFFDNP QMALAKDNEQ 
0141 DMIVKEMYDR AAEQLIRKLP SIRAADIRSD EEQTSTTTDT PATPARVSTT LGN

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             atctggtagc aaaatatctt gatggcgtta 
-070 ctgtacgtaa agtgatttac gtaccaggta aactcctcaa tctggtcgtt ggctaagcgc gggaggaagc 
0001 gtgcgatatc tggcaacatt gttgttatct ctggcggtgt taatcaccgc cgggtgtggc tggcatctgc 
0071 gtgataccac gcaggttcct tccactatga aggtcatgat cctggactca ggcgatccga acgggccatt 
0141 aagccgtgcg gtgcgtaacc agttacgtct gaatggtgtc gagttgcttg ataaagaaac cacgcgtaag 
0211 gacgttccat ccttgcgttt gggtaaagtg agcatcgcga aagataccgc atcggtattc cgtaacggtc 
0281 aaacagcaga gtatcagatg atcatgacgg ttaatgcgac cgtgttgatc cccggccgtg atatctaccc 
0351 gattagcgcc aaagtcttcc gttcgttctt cgataacccg caaatggcgt tagcgaaaga taacgaacaa 
0421 gacatgatcg taaaagagat gtacgaccgt gctgccgaac agctgattcg taagctgcca agcatccgtg 
0491 ctgcggatat tcgttccgac gaagaacaga cgtcgaccac aacggatact ccggcaacgc ctgcacgcgt 
0561 ctccaccacg ctgggtaact gatgattcgg ttgtacccgg aacaactccg cgcgcagctc aatgaagggc 
0631 tgcgcgcggc gtatctttta cttggtaacg atcctctgtt attgcaggaa ag