|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
28
(LD)
,
OCR42,43-3 (LD 28B_CRS)
(D)
,
OCR42,43-4 (LD 28B_P/O)
(D)
,
OCR43
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ylbH
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ylbH
Search strains by all related name:
ylbH b0499 ECK0493 JW0488 o236 o236a
|
General information (Go to Linear View: )
|
|
Gene Name
|
ylbH
|
|
Alternative name
|
b0499,ECK0493,JW0488,o236,o236a
|
|
Location, Length
|
527,176 - 527,883
(
+
)
;
11.36
min
;
708
(bp) ,
235
(aa)
|
|
Product
|
|
|
Operon Name
|
rhsD-ybbC-ylbH-ybbD
|
|
Note
|
pseudogene, rhs-like
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
RHSE_ECOLI
(
P24211
;
P76869; P77471
)
|
|
- Protein name
|
RhsE protein.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=rhsE; OrderedLocusNames=b1456;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ylbH
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
unnamed protein product [Danio rerio]
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Putative uncharacterized protein ylbH
|
|
PSI-BLAST
|
Putative uncharacterized protein ylbH
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
conserved protein, rhs-like [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AGGGAGCAAA GTTACCTTAT GAAGTTGCGG
-070 GTGGTGTATT TATTATAGAA ATTAATAAGA AAAATGGATG TGTTTTGAAT TTCCTACATA GTAAATAATG
0001 ctggcgctga tggatgcgga tggaaacatt gcgtggagcg gggagtatga tgagtggggc aaccagctga
0071 atgaagagaa cccgcatcac ctgcaccagc cgtaccggct gccggggcag cagtatgata aggagtcggg
0141 gctgtactac aaccggaacc ggtactacga tccgttgcag gggcggtata tcactcagga cccgataggg
0211 ctggaggggg gatggagtct gtatgcgtat ccgctgaatc cggtgaatgg tattgatcca ttagggttaa
0281 gtcccgcaga tgtagcgcta ataagaagaa aagatcaact aaaccatcaa agagcatggg atatattatc
0351 tgatacttat gaagatatga agagattaaa tttaggtggg actgatcaat ttttccattg tatggcattt
0421 tgtcgagtgt ctaaattaaa tgacgctggt gttagccgat cggcgaaagg gctgggttat gaaaaagaga
0491 ttagagatta cgggttaaat ctgttcggta tgtacggcag aaaagtaaag ctatcccatt ctgaaatgat
0561 tgaagataat aaaaaagact tggctgtaaa tgaccatggg ttgacatgtc catcaacaac agattgctca
0631 gatagatgta gtgattatat taatccagag cataaaaaaa cgataaaggc tttacaagat gctggctatc
0701 tcaagtaaTC TATCAAAGAT GATAATATTT ATTTTTGCTA TTATAATCAT TGTTGTTTTA TGCGTAATTA
0771 CTTATCTTTA TTTATACAAA GATGAATCTC TTGTAAGT
|
