|
PEC Original Annotations
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Essentiality
|
|
Class
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non-essential
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|
References (PMID)
|
|
|
Deletion
|
28
(LD)
,
OCR42
(D)
,
OCR42,43-3 (LD 28B_CRS)
(D)
,
OCR42,43-4 (LD 28B_P/O)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
qmcA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
qmcA
Search strains by all related name:
qmcA b0489 ECK0483 f305 f305a JW0478 ybbK
|
General information (Go to Linear View: )
|
|
Gene Name
|
qmcA
|
|
Alternative name
|
b0489,ECK0483,f305,f305a,JW0478,ybbK
|
|
Location, Length
|
514,080 - 514,997
(
-
)
;
11.08
min
;
918
(bp) ,
305
(aa)
|
|
Product
|
multicopy suppressor of ftsH htpX double mutant; membrane-anchored predicted protease with C-terminal cytoplasmic PHB domain
|
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Operon Name
|
qmcA-ybbJ
|
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Note
|
putative protease; GO_component: GO:0009274 - peptidoglycan-based cell wall
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0016020
;
membrane ( qmcA )
GO:0016021
;
integral to membrane ( qmcA )
|
|
PID
|
1786697
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YBBK_ECOLI
(
P77367
)
|
|
- Protein name
|
Hypothetical protein ybbK.
|
|
- Synonyms
|
|
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- Gene name
|
OrderedLocusNames=b0489, c0610, z0642, ECs0552, SF0434, S0441;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ybbK
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Formiii Crystal Complexed With Adp)
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein ybbK
|
|
PSI-BLAST
|
Keratin type II cuticular Hb4
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative protease [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
BAND_7
|
| Sequences |
Amino acid
FASTA format
|
0001 MLIFIPILIF VALVIVGAGV KIVPQGYQWT VERFGRYTKT LQPGLSLVVP FMDRIGRKIN MMEQVLDIPS
0071 QEVISKDNAN VTIDAVCFIQ VIDAPRAAYE VSNLELAIIN LTMTNIRTVL GSMELDEMLS QRDSINSRLL
0141 RIVDEATNPW GIKVTRIEIR DVRPPAELIS SMNAQMKAER TKRAYILEAE GIRQAEILKA EGEKQSQILK
0211 AEGERQSAFL QAEARERSAE AEARATKMVS EAIASGDIQA VNYFVAQKYT EALQQIGSSS NSKVVMMPLE
0281 ASSLMGSIAG IAELVKDSAN KRTQP
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gcaggaataa gggggaactc tctttcagta
-070 atcaggtata atttgtttaa tcaagcagca attttgctga ttatggacgg tacaacagga ggtttttccg
0001 atgcttatct ttatcccgat tctcattttt gtcgcgctgg tcattgtcgg cgcgggtgtc aaaatcgtac
0071 cgcagggcta tcagtggaca gtagaacgct ttggtcgcta taccaaaacg ttacagccgg ggctcagtct
0141 ggtggtgccg tttatggatc gcattggtcg caagatcaat atgatggagc aagtgctcga tatcccttcc
0211 caggaagtta tctcgaaaga taacgccaac gttaccatcg acgccgtgtg ctttattcag gtgattgacg
0281 cgccgcgcgc ggcttatgaa gtcagcaatc tggagctggc gatcatcaac ctgaccatga ctaacatccg
0351 taccgtgctg ggttcaatgg aacttgacga aatgctctct cagcgcgaca gcatcaactc acgcctgctg
0421 cgtattgtcg atgaagccac caacccgtgg gggattaaag tcacccgtat tgaaattcgc gacgtgcgcc
0491 caccggcaga gcttatctct tcaatgaacg cgcagatgaa agcggaacgt accaaacgcg cttacattct
0561 tgaagcggaa gggatccgtc aggcggaaat cctcaaagcc gaaggtgaaa aacagtcgca aatcctgaaa
0631 gcggaaggcg aacgtcagtc ggcgttttta caggctgaag cgcgtgaacg ttccgccgaa gcagaagccc
0701 gcgccaccaa aatggtgtct gaagctatcg cctccggtga tattcaggcg gtgaactact tcgtagcgca
0771 gaaatacacc gaagcgttac agcagatcgg ttcctccagt aacagcaaag tagtgatgat gccattagag
0841 gccagcagcc tgatggggtc gattgccggg attgccgagc tggtgaaaga cagcgccaac aaacggactc
0911 agccatgatg gagttaatgg tcgttcatcc acatattttc tggctcagtc tcggcggttt gctgctggca
0981 gccgagatgc tgggcggaaa tggttatttg ttgtggag
|
