MG1655
W3110
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Gene Report : ybaK
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion 28 (LD)  ,  OCR42 (D)  ,  OCR42,43-3 (LD 28B_CRS) (D)  ,  OCR42,43-4 (LD 28B_P/O) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  ybaK
Related strains
     Strains Search Search strains by gene name:  ybaK   Search strains by all related name:  ybaK b0481 ECK0475 f159 JW0470 proX

General information  (Go to Linear View:)
 Gene Name ybaK  
 Alternative name b0481,ECK0475,f159,JW0470,proX  
 Location, Length 505,827 - 506,306 (  -  ) ;   10.90 min ; 480 (bp) ,   159 (aa) Go to Linear View
 Product hypothetical protein  
 Operon Name ybaK  
 Note  
 Function  
 Gene Ontology GO:0005215; transporter activity ( proX )
GO:0005488; binding ( proX )
GO:0005515; protein binding ( proX )
GO:0005515; protein binding ( ybaK )
GO:0006350; transcription ( ybaK )
GO:0006355; regulation of transcription, DNA-dependent ( ybaK )
GO:0006810; transport ( proX )
GO:0006865; amino acid transport ( proX )
GO:0042597; periplasmic space ( proX )
 PID 1786688  
 EC number
  (KEGG Pathway)
 
 
SWISS-PROT  ( Show details [ 2 more] )
  botton Entry name(Acc.no) YBAK_ECOLI ( P37175 ; P77281 )
    -  Protein name Protein ybaK.  
    -  Synonyms  
    -  Gene name Name=ybaK; OrderedLocusNames=b0481, SF0426, S0433;  

 Linear View (Whole Mode)
View Location
   495.0  –  520.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP ybaK (  homologous genes of other bacterias  )   proX (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Crystal Structure Of Cysteinyl-Trna(Pro) Deacylase Protein From H. Influenzae (Hi1434)  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Protein ybaK  
         PSI-BLAST Prolyl-tRNA synthetase
    nr     (database updated : 2007.02.20 )
         BLAST hypothetical protein b0481 [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE CK2_PHOSPHO_SITE    MYRISTYL    AMIDATION     

Other Cross-Reference
    COG COG2606S 
    EcoCyc ybaK 

Sequences
Amino acid
FASTA format
0001 MTPAVKLLEK NKISFQIHTY EHDPAETNFG DEVVKKLGLN PDQVYKTLLV AVNGDMKHLA VAVTPVAGQL 
0071 DLKKVAKALG AKKVEMADPM VAQRSTGYLV GGISPLGQKK RLPTIIDAPA QEFATIYVSG GKRGLDIELA 
0141 AGDLAKILDA KFADIARRD

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             caccatcctg ccaatactct taggcaagat 
-070 gactcttttt tttggaccgc catcaggcgt atgcttgctt cgtttttttg tttaaggcag gaaaattacc 
0001 atgacacccg cagttaaatt actcgaaaaa aacaagattt cgtttcaaat ccatacctac gagcacgatc 
0071 cggctgaaac caattttggc gatgaagtcg tcaaaaaatt aggtttgaat ccggatcagg tctacaaaac 
0141 gctgctggtg gcagtgaacg gtgatatgaa acaccttgcc gtggccgtta cgccggtcgc aggtcaactg 
0211 gatcttaaaa aagtagcaaa agcgctgggt gccaagaaag ttgagatggc cgatccgatg gtcgcgcagc 
0281 gttcgacggg atacctggtt ggggggatta gcccactggg gcagaaaaaa cgtctgccaa cgattatcga 
0351 cgcccccgca caagaatttg ccactattta tgtttccggc ggcaagcgcg gactggatat cgaactggcg 
0421 gcaggcgatc tggcaaagat cctcgatgcc aaatttgctg atatcgcccg ccgcgattaa gcattgtgcc 
0491 ggatgcaaac atccggcact ttcggattac tgccagctca cctcaccttt cggttcataa acactcacat 
0561 ccagcggcga gcttttctgg