|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR41
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
queC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
queC
Search strains by all related name:
queC b0444 ECK0438 f231 JW0434 ybaX
|
General information (Go to Linear View: )
|
|
Gene Name
|
queC
|
|
Alternative name
|
b0444,ECK0438,f231,JW0434,ybaX
|
|
Location, Length
|
464,076 - 464,771
(
-
)
;
10.00
min
;
696
(bp) ,
231
(aa)
|
|
Product
|
7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis
|
|
Operon Name
|
queC
|
|
Note
|
GO_process: GO:0006805 - xenobiotic metabolic process
|
|
Function
|
enzyme: queuosine biosynthesis
|
|
Gene Ontology
|
GO:0004055
;
argininosuccinate synthase activity ( queC )
GO:0005515
;
protein binding ( queC )
GO:0005524
;
ATP binding ( queC )
GO:0006526
;
arginine biosynthetic process ( queC )
GO:0008616
;
queuosine biosynthetic process ( queC )
|
|
PID
|
1786648
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YBAX_ECOLI
(
P77756
)
|
|
- Protein name
|
Hypothetical protein ybaX.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ybaX; OrderedLocusNames=b0444;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ybaX
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Argininosuccinate Synthetase
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Queuosine biosynthesis protein queC
|
|
PSI-BLAST
|
Queuosine biosynthesis protein queC
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted aluminum resistance protein [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MKRAVVVFSG GQDSTTCLVQ ALQQYDEVHC VTFDYGQRHR AEIDVARELA LKLGARAHKV LDVTLLNELA
0071 VSSLTRDSIP VPDYEPEADG IPNTFVPGRN ILFLTLAAIY AYQVKAEAVI TGVCETDFSG YPDCRDEFVK
0141 ALNHAVSLGM AKDIRFETPL MWIDKAETWA LADYYGKLDL VRNETLTCYN GFKGDGCGHC AACNLRANGL
0211 NHYLADKPTV MAAMKQKTGL R
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tttaccgaag cctggcttcc cgcgccatcg
-070 caatgaatag ctggtccggg ttaatcgcag gcgttaccat aacgctttta ttgttcaagc aggattatct
0001 atgaaacgtg ctgtcgttgt gttcagtgga ggtcaggatt ccaccacctg tctggtgcag gcattacaac
0071 aatatgatga agtccattgc gtgacgttcg attacggtca gcggcatcgc gcagaaatcg acgtggcacg
0141 cgaactggcg ctgaaactgg gggcacgcgc gcataaggtg ctggatgtca ccctgctcaa cgagctggcg
0211 gtcagtagcc tgacgcgtga cagcattccg gtgcctgatt atgaacctga agccgatggt atcccgaata
0281 cgtttgtccc agggcgtaat attttgttcc tgacgctggc ggcaatatat gcgtatcagg taaaagcaga
0351 agccgtaatt actggcgtct gcgaaacgga tttctccggc tacccggatt gccgcgatga gtttgtgaaa
0421 gcactaaacc atgccgtcag tttgggcatg gcgaaagata ttcgttttga aacgccgctg atgtggattg
0491 ataaagcgga aacctgggcg ctggcagatt attacggcaa actggattta gtccgtaacg aaacgttgac
0561 ctgctataac ggctttaaag gcgacggttg cggtcattgt gcggcatgta atttacgcgc caacggtttg
0631 aatcattatc tggccgataa accgacggtg atggcagcga tgaagcagaa aaccgggttg aggtaattat
0701 tccgggtgtc gccggatgcg gcttgagcat ccggcaccac aaaacgttta cttaaccatc tgctccagct
0771 tttcgcgcaa ttccccttcc agagct
|
