|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR40
(D)
,
OCR40-2
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
fadM
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
fadM
Search strains by all related name:
fadM b0443 ECK0437 JW0433 o132 tesC ybaW
|
General information (Go to Linear View: )
|
|
Gene Name
|
fadM
|
|
Alternative name
|
b0443,ECK0437,JW0433,o132,tesC,ybaW
|
|
Location, Length
|
463,626 - 464,024
(
+
)
;
9.99
min
;
399
(bp) ,
132
(aa)
|
|
Product
|
long-chain acyl-CoA thioesterase III
|
|
Operon Name
|
fadM
|
|
Note
|
|
|
Function
|
enzyme; fatty acid degradation
|
|
Gene Ontology
|
GO:0016787
;
hydrolase activity ( ybaW )
|
|
PID
|
1786647
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YBAW_ECOLI
(
P77712
)
|
|
- Protein name
|
Hypothetical protein ybaW.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ybaW; OrderedLocusNames=b0443;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ybaW
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of Escherichia Coli Hypothetical Protein Ybaw
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Putative acyl-CoA thioester hydrolase ybaW
|
|
PSI-BLAST
|
Putative acyl-CoA thioester hydrolase ybaW
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b0443 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MQTQIKVRGY HLDVYQHVNN ARYLEFLEEA RWDGLENSDS FQWMTAHNIA FVVVNININY RRPAVLSDLL
0071 TITSQLQQLN GKSGILSQVI TLEPEGQVVA DALITFVCID LKTQKALALE GELREKLEQM VK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CCTGTAATTA ATTTGCATAG TGGCAATTTT
-070 TTGCCAGACT GAAGAGGTCA TACCAGTTAT GACCTCTGTA CTTATAACAA CAACGTAAGG TTATTGCGCT
0001 atgcaaacac aaatcaaagt tcgtggatat catctcgacg tttaccagca cgtcaacaac gcccgctacc
0071 ttgaatttct cgaagaagcc cgctgggatg ggttggaaaa tagcgacagt tttcagtgga tgacggccca
0141 taacatcgcc ttcgtcgtgg tcaatatcaa tattaactat cgtcgcccag cggtattaag tgacctgtta
0211 actattacca gtcagttgca gcaattaaac ggtaaaagcg gcatcttaag ccaggtcatt acactggagc
0281 cggaagggca ggtggtagcg gatgcgctta ttacgtttgt ttgtattgat cttaaaacgc agaaagcatt
0351 agctctggaa ggggaattgc gcgaaaagct ggagcagatg gttaagtaaA CGTTTTGTGG TGCCGGATGC
0421 TCAAGCCGCA TCCGGCGACA CCCGGAATAA TTACCTCAAC CCGGTTTTCT GCTTCATCGC TGCCATCACC
0491 GTCGGTTTA
|
