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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
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OCR40
(D)
,
OCR40-4
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
thiI
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Related strains
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Strains Search
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Search strains by gene name:
thiI
Search strains by all related name:
thiI b0423 ECK0417 JW0413 nuvA o482 yajJ yajK
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General information (Go to Linear View: )
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Gene Name
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thiI
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Alternative name
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b0423,ECK0417,JW0413,nuvA,o482,yajJ,yajK
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Location, Length
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440,773 - 442,221
(
+
)
;
9.50
min
;
1449
(bp) ,
482
(aa)
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Product
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tRNA s(4)U8 sulfurtransferase
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Operon Name
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thiI
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Note
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GO_process: GO:0009228 - thiamin biosynthetic process; GO_process: GO:0009451 - RNA modification
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Function
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enzyme; tRNA modification
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Gene Ontology
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GO:0003723
;
RNA binding ( thiI )
GO:0005737
;
cytoplasm ( thiI )
GO:0009228
;
thiamin biosynthetic process ( thiI )
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PID
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1786625
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
THII_ECOLI
(
P77718
)
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- Protein name
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Thiamine biosynthesis protein thiI.
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- Synonyms
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- Gene name
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Name=thiI; OrderedLocusNames=b0423;
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MMBR References
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Nucleic Acids Res. 1998;26:2606-2610
Identification of a gene involved in the generation of 4-thiouridine in tRNA.
Mueller, E. G., C. J. Buck, P. M. Palenchar, L. E. Barnhart, and J. L. Paulson.
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J Biol Chem. 1997;272:15702-15707
Characterization of thiL, encoding thiamin-monophosphate kinase, in Salmonella typhimurium.
Webb, E., and D. Downs.
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| Sequences |
Amino acid
FASTA format
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0001 MKFIIKLFPE ITIKSQSVRL RFIKILTGNI RNVLKHYDET LAVVRHWDNI EVRAKDENQR LAIRDALTRI
0071 PGIHHILEVE DVPFTDMHDI FEKALVQYRD QLEGKTFCVR VKRRGKHDFS SIDVERYVGG GLNQHIESAR
0141 VKLTNPDVTV HLEVEDDRLL LIKGRYEGIG GFPIGTQEDV LSLISGGFDS GVSSYMLMRR GCRVHYCFFN
0211 LGGAAHEIGV RQVAHYLWNR FGSSHRVRFV AINFEPVVGE ILEKIDDGQM GVILKRMMVR AASKVAERYG
0281 VQALVTGEAL GQVSSQTLTN LRLIDNVSDT LILRPLISYD KEHIINLARQ IGTEDFARTM PEYCGVISKS
0351 PTVKAVKSKI EAEEEKFDFS ILDKVVEEAN NVDIREIAQQ TEQEVVEVET VNGFGPNDVI LDIRSIDEQE
0421 DKPLKVEGID VVSLPFYKLS TKFGDLDQNK TWLLWCERGV MSRLQALYLR EQGFNNVKVY RP
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 TTAGTGGTAT ACTTCCGCGC CTGGATGCAG
-070 CCGCAGGTGT GGGCTGCTGT ATTTTTCCCT ATACAAGTCG CTTAAGGCTT GCCAACGAAC CATTGCCGCC
0001 atgaagttta tcattaaatt gttcccggaa atcaccatca aaagccaatc tgtgcgcttg cgctttataa
0071 aaatccttac cgggaacatt cgtaacgttt taaagcacta tgatgagacg ctcgctgtcg tccgccactg
0141 ggataacatc gaagttcgcg caaaagatga aaaccagcgt ctggctattc gcgacgctct gacccgtatt
0211 ccgggtatcc accatattct cgaagtcgaa gacgtgccgt ttaccgacat gcacgatatt ttcgagaaag
0281 cgttggttca gtatcgcgat cagctggaag gcaaaacctt ctgcgtacgc gtgaagcgcc gtggcaaaca
0351 tgattttagc tcgattgatg tggaacgtta cgtcggcggc ggtttaaatc agcatattga atccgcgcgc
0421 gtgaagctga ccaatccgga tgtgactgtc catctggaag tggaagacga tcgtctcctg ctgattaaag
0491 gccgctacga aggtattggc ggtttcccga tcggcaccca ggaagatgtg ctgtcgctca tttccggtgg
0561 tttcgactcc ggtgtttcca gttatatgtt gatgcgtcgc ggctgccgcg tgcattactg cttctttaac
0631 ctcggcggcg cggcgcatga aattggcgtg cgtcaggtgg cgcattatct gtggaaccgc tttggcagct
0701 cccaccgcgt gcgttttgtc gctattaatt tcgaaccggt cgtcggggaa attctcgaga aaatcgacga
0771 cggtcagatg ggcgttatcc tcaaacgtat gatggtgcgt gccgcatcta aagtggctga acgttacggc
0841 gtacaggcgc tggtcaccgg cgaagcgctc ggccaggtgt ccagccagac gctgaccaac ctgcgcctga
0911 ttgataacgt ctccgacacg ctgatcctgc gtccgctgat ctcttacgac aaagagcaca tcatcaacct
0981 ggcccgccag attggcaccg aagactttgc tcgcacgatg ccggaatatt gtggtgtgat ctccaaaagc
1051 ccgacggtga aagcagttaa atcgaagatt gaagcggaag aagagaagtt cgacttcagc attctcgata
1121 aagtggttga ggaagcgaat aacgttgata tccgcgaaat cgcccagcag accgagcagg aagtggtgga
1191 agtggaaacc gtcaatggct tcggcccgaa cgacgtgatc ctcgatatcc gttctatcga tgaacaggaa
1261 gataagccac tgaaagtcga agggattgat gtggtttctc tgccgttcta taaactgagc accaaatttg
1331 gcgatctcga ccagaacaaa acctggctgc tgtggtgtga gcgcggggtg atgagccgtc tgcaggcgct
1401 ctatctgcgc gagcagggct ttaacaatgt gaaggtatat cgcccgtaaT TTGTGGTTTT TACGTCGCAT
1471 CTGGTCAGAT GCGACGTTTG CCGCATCCGA CACTACTCGT AATAATTATA AATCCCTGCC GCCATCACCA
1541 GTTGTGATG
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