|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
essential
|
|
References (PMID)
|
J Mol Microbiol Biotechnol. 2001;3(3):483-9.
Identification of novel essential Escherichia coli genes conserved among pathogenic bacteria.
Freiberg C, Wieland B, Spaltmann F, Ehlert K, Brotz H, Labischinski H.
(
11361082
)
|
|
|
Deletion
|
OCR16,17-3 (BK2-17 / AK1-17)
(D)
,
OCR17
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
tsaE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
tsaE
Search strains by all related name:
tsaE b4168 ECK4164 JW4126 o153a yjeE
|
General information (Go to Linear View: )
|
|
Gene Name
|
tsaE
|
|
Alternative name
|
b4168,ECK4164,JW4126,o153a,yjeE
|
|
Location, Length
|
4,393,608 - 4,394,069
(
+
)
;
94.70
min
;
462
(bp) ,
153
(aa)
|
|
Product
|
tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; ADP binding protein
|
|
Operon Name
|
yjeFE-amiB-mutL-miaA-hfq-hflXKC
|
|
Note
|
|
|
Function
|
enzyme; tRNA modification
|
|
Gene Ontology
|
GO:0000166
;
nucleotide binding ( yjeE )
GO:0005524
;
ATP binding ( yjeE )
|
|
PID
|
1790610
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YJEE_ECOLI
(
P31805
)
|
|
- Protein name
|
Hypothetical UPF0079 protein yjeE.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yjeE; OrderedLocusNames=b4168, z5775, ECs5144, SF4323, S4591;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yjeE
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, The Yjee Protein
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0079 ATP-binding protein yjeE
|
|
PSI-BLAST
|
Glutamine transport ATP-binding protein glnQ
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein Z5775 [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
MYRISTYL
ATP_GTP_A
|
| Sequences |
Amino acid
FASTA format
|
0001 MMNRVIPLPD EQATLDLGER VAKACDGATV IYLYGDLGAG KTTFSRGFLQ ALGHQGNVKS PTYTLVEPYT
0071 LDNLMVYHFD LYRLADPEEL EFMGIRDYFA NDAICLVEWP QQGTGVLPDP DVEIHIDYQA QGREARVSAV
0141 SSAGELLLAR LAG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GACGTACTGG CGGCGCGTTT TGGAACGCGC
-070 GGGATGCTGG CAACCGATCT CTTTTCCACG CTACAGCGTA TTGTTAACCC GGAAGTGACT GATAAAAACC
0001 atgatgaatc gagtaattcc gctccctgat gagcaggcaa cattagacct gggcgagcgg gtagcgaaag
0071 cctgcgatgg cgcaaccgta atctatctgt atggcgattt aggcgcaggt aaaaccacct ttagccgggg
0141 ctttttacag gctctgggtc atcagggtaa tgtcaaaagc cccacttata cgctggtcga accctatacg
0211 ctcgacaact taatggtcta tcactttgat ttgtaccgcc ttgccgatcc cgaggagctg gagtttatgg
0281 ggatccgcga ttattttgcc aacgatgcca tctgcctggt ggagtggcca caacaaggta caggtgttct
0351 tcctgacccg gatgtcgaaa tacacattga ttatcaggca caaggccgtg aggcgcgcgt gagtgcggtt
0421 tcctctgcgg gtgaattgtt gctggcgcgt ttagccggtt aaCCTTTGAA AGGTGGCGGG ATGATGTATC
0491 GCATCAGAAA TTGGTTGGTA GCGACGCTGC TGCTGCTGTG CACGCCGGTG GGTGCCGCGA CGCTCTCTGA
0561 TA
|
