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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
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OCR16-5
(D)
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Related gene (W3110 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
mscM
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Related strains
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Strains Search
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Search strains by gene name:
mscM
Search strains by all related name:
mscM b4159 ECK4155 JW4120 yjeP
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General information (Go to Linear View: )
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Gene Name
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mscM
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Alternative name
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b4159,ECK4155,JW4120,yjeP
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Location, Length
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4,384,070 - 4,387,393
(
-
)
;
94.49
min
;
3324
(bp) ,
1107
(aa)
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Product
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mechanosensitive channel protein, miniconductance
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Operon Name
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psd-yjeP
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Note
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putative periplasmic binding protein; GO_component: GO:0042597 - periplasmic space
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Function
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transport; ions
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Gene Ontology
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GO:0005886
;
plasma membrane ( yjeP )
GO:0016020
;
membrane ( yjeP )
GO:0016021
;
integral to membrane ( yjeP )
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PID
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2367355
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
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YJEP_ECOLI
(
P39285
;
P76798
)
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- Protein name
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Hypothetical UPF0003 protein yjeP precursor.
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- Synonyms
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- Gene name
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Name=yjeP; OrderedLocusNames=b4159;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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yjeP
(
homologous genes of other bacterias
)
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PDB
(database updated :
2007.02.20
)
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PSI-BLAST
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Chain A, Crystal Structure Of Mscs At 3.9 Resolution
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SWISS-PROT
(database updated :
2007.02.20
)
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BLAST
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Hypothetical mscS family protein yjeP precursor
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PSI-BLAST
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Myosin-8
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nr
(database updated :
2007.02.20
)
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BLAST
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predicted mechanosensitive channel [Escherichia coli K12]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
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PROSITE
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ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
LEUCINE_ZIPPER
UPF0003
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| Sequences |
Amino acid
FASTA format
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0001 MRLIITFLMA WCLSWGAYAA TAPDSKQITQ ELEQAKAAKP AQPEVVEALQ SALNALEERK GSLERIKQYQ
0071 QVIDNYPKLS ATLRAQLNNM RDEPRSVSPG MSTDALNQEI LQVSSQLLDK SRQAQQEQER AREIADSLNQ
0141 LPQQQTDARR QLNEIERRLG TLTGNTPLNQ AQNFALQSDS ARLKALVDEL ELAQLSANNR QELARLRSEL
0211 AEKESQQLDA YLQALRNQLN SQRQLEAERA LESTELLAEN SADLPKDIVA QFKINRELSA ALNQQAQRMD
0281 LVASQQRQAA SQTLQVRQAL NTLREQSQWL GSSNLLGEAL RAQVARLPEM PKPQQLDTEM AQLRVQRLRY
0351 EDLLNKQPLL RQIHQADGQP LTAEQNRILE AQLRTQRELL NSLLQGGDTL LLELTKLKVS NGQLEDALKE
0421 VNEATHRYLF WTSDVRPMTI AWPLEIAQDL RRLISLDTFS QLGKASVMML TSKETILPLF GALILVGCSI
0491 YSRRYFTRFL ERSAAKVGKV TQDHFWLTLR TLFWSILVAS PLPVLWMTLG YGLREAWPYP LAVAIGDGVT
0561 ATVPLLWVVM ICATFARPNG LFIAHFGWPR ERVSRGMRYY LMSIGLIVPL IMALMMFDNL DDREFSGSLG
0631 RLCFILICGA LAVVTLSLKK AGIPLYLNKE GSGDNITNHM LWNMMIGAPL VAILASAVGY LATAQALLAR
0701 LETSVAIWFL LLVVYHVIRR WMLIQRRRLA FDRAKHRRAE MLAQRARGEE EAHHHSSPEG AIEVDESEVD
0771 LDAISAQSLR LVRSILMLIA LLSVIVLWSE IHSAFGFLEN ISLWDVTSTV QGVESLEPIT LGAVLIAILV
0841 FIITTQLVRN LPALLELAIL QHLDLTPGTG YAITTITKYL LMLIGGLVGF SMIGIEWSKL QWLVAALGVG
0911 LGFGLQEIFA NFISGLIILF EKPIRIGDTV TIRDLTGSVT KINTRATTIS DWDRKEIIVP NKAFITEQFI
0981 NWSLSDSVTR VVLTIPAPAD ANSEEVTEIL LTAARRCSLV IDNPAPEVFL VDLQQGIQIF ELRIYAAEMG
1051 HRMPLRHEIH QLILAGFHAH GIDMPFPPFQ MRLESLNGKQ TGRTLTSAGK GRQAGSL
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgccccgctt cctgctgaag agatcgaagc
-070 agaacacgac gccagcccat tggttgacga caaaaaagac caggtctaat ccatcaaagg aaacgctgac
0001 gtgcgcctga ttatcacttt tctgatggcc tggtgcctca gttggggggc gtacgccgcg acggcccccg
0071 atagcaaaca aatcactcag gaactggagc aggcaaaagc ggcgaaaccc gcacagccgg aagtcgtaga
0141 ggcgctccag tctgccttaa atgcgcttga ggaacgaaaa ggttcccttg agcgcatcaa acaatatcag
0211 caagttatcg ataattatcc gaaactctcc gctactctgc gcgcacaatt aaacaacatg cgtgacgagc
0281 cgcgcagcgt gtcgccggga atgtctaccg acgcgctgaa tcaggaaatt ctccaggtca gcagccagtt
0351 gctggataaa agccgtcagg cccagcaaga gcaggagcgc gcccgcgaga ttgccgattc gctgaatcaa
0421 ctgccgcaac agcaaaccga cgcccgccgt cagttaaatg agatcgagcg ccgcctggga acgcttaccg
0491 gcaatactcc gctcaatcag gcacaaaatt tcgcgttgca gtctgactct gcacgtctta aggcgctcgt
0561 tgatgaactg gagctggcgc agctgtctgc caataaccgc caggaattag cgcgcttacg ctcagagctg
0631 gcggaaaaag agagccagca actggatgcg tatttgcagg ccttgcgtaa tcaattaaac agccaacgtc
0701 agcttgaggc ggagcgggcg ctggaaagta ccgaattgct ggcagaaaac agcgccgatt tgccgaaaga
0771 tatcgtcgcg caattcaaaa ttaaccgcga actatcggcg gctttgaatc aacaggcgca gcggatggat
0841 ctcgttgcct cgcaacagcg tcaggctgcc agccagacgt tacaggtccg gcaggcgttg aatacgctgc
0911 gtgaacagtc gcaatggctg ggatcgtcca atctgctcgg cgaagcgctg cgggcgcagg tggcacggct
0981 gccggaaatg ccgaaaccac aacagcttga taccgaaatg gcgcagttgc gtgtgcaacg gttacgttat
1051 gaggatctgc ttaataaaca gccgctgcta cggcaaattc atcaggccga cggtcagccg ctgactgccg
1121 agcaaaaccg tattctggaa gcacaactgc gcactcagcg tgagttgctg aactcattgt tgcagggtgg
1191 cgacacgcta ctattggaac tgaccaagct gaaagtctcc aacgggcaac tggaggatgc gctgaaagag
1261 gtgaacgaag caacgcaccg ctatctgttc tggacctctg acgtgcgccc gatgaccatc gcctggccgc
1331 tggaaatcgc ccaggatctg cgtcgtctca tttcgctgga caccttcagt cagttgggca aagccagtgt
1401 gatgatgctg accagcaaag agacaatttt gccgctgttt ggcgcgttga ttctggtcgg ttgcagtatt
1471 tactcgcgcc gctatttcac ccgttttctt gaacgttcgg cggcgaaagt tggcaaagtg actcaggatc
1541 acttctggct gacgttgcgc actcttttct ggtcgattct cgtcgcgtca ccgttaccgg tgctgtggat
1611 gacgctgggt tacggcttgc gcgaggcgtg gccttatccg ctggcggtcg cgattggcga tggtgtaacg
1681 gccaccgtgc cgctgctgtg ggtagtgatg atttgcgcca cctttgcccg cccgaacggc ttgtttatcg
1751 ctcattttgg ctggccgcgc gaacgtgttt cccgtgggat gcgctactac ctgatgagca tcgggcttat
1821 tgtgccgctg attatggcgc tgatgatgtt cgataacctc gacgaccgtg aattctccgg ttcgctggga
1891 cggctttgct ttatcctcat ttgcggtgcg ctggcggtgg tcaccctcag cctgaaaaag gccgggattc
1961 cgctgtatct caacaaagag ggcagcggcg acaacattac caaccatatg ctgtggaaca tgatgattgg
2031 cgcgccgttg gttgccattc tggcgtcggc ggtgggttat ctggcaacgg cacaggcgct gttagcgagg
2101 cttgaaacct cggttgccat ctggttcctg ctactggtgg tttatcacgt tatccgccgc tggatgctga
2171 tccagcgccg caggctggcg tttgatcggg cgaagcatcg ccgggcagag atgttagcgc aacgtgcgcg
2241 tggcgaagag gaagcgcatc atcacagtag cccggaagga gcaattgaag tcgatgaaag cgaagtcgat
2311 ctcgatgcca tcagtgcgca atccttgcgg ctggtgcgct caattttgat gttgatcgcc ctgctttctg
2381 tcattgtgct gtggtcagaa atccattccg ctttcggctt cctcgaaaat atttcgctgt gggatgtcac
2451 ctccacggta cagggcgtag aaagtctgga gccaattacc ctcggtgcgg tgctgattgc cattctggtg
2521 tttatcatca ccacgcagct ggtgcgcaac ttgcccgcgc tgctggaact ggcgattttg cagcacctgg
2591 atttaacgcc gggtacgggt tacgccatca ccaccatcac caaatatctg ctgatgctga ttggcgggct
2661 ggtcggcttc tcaatgattg gtattgagtg gtcgaaattg cagtggctgg ttgccgcgct cggtgttggt
2731 ctcggttttg gtttgcagga aattttcgcc aactttatct ctggtctgat tatcctgttc gaaaaaccga
2801 ttcgcattgg cgatacggtg acaattcgcg atctcaccgg tagcgtgacg aaaattaaca cccgcgccac
2871 caccatcagc gactgggacc gtaaagagat aatcgtgccg aacaaggcgt ttattaccga gcagtttatc
2941 aactggtcgc tctctgactc ggtcacgcgc gtggtgttga cgataccggc ccctgccgat gccaatagcg
3011 aagaagtgac ggaaatcctg ctcaccgcag cgcgtcgctg ctcgctggtg atcgacaacc cggcaccgga
3081 agtcttcctg gtggatctgc aacaggggat tcagattttc gagctgcgta tttacgccgc tgagatgggt
3151 caccgtatgc cgctacgcca tgagatccac cagctgattc tggctggctt ccatgcccac ggtatcgata
3221 tgccattccc gcccttccag atgcgtctgg aaagcctcaa cggtaaacaa acggggagaa cgctgacgtc
3291 tgcgggcaaa ggtcgtcagg cgggaagttt gtaagtttgt gtgccggatg aaccaatccg gctcacaaac
3361 aaaactgata gcgcagaaaa aactgccaca gccagtagcc gaaaatagcc agcgcggtgg cgta
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