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PEC Original Annotations
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Essentiality
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Class
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essential
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References (PMID)
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Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
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Deletion
|
OCR10,11-11 (AK1-16 / BK2-16)
(D)
,
OCR10,11-16 (BK5-16 / AK7-16)
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
rplL
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Related strains
|
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Strains Search
|
Search strains by gene name:
rplL
Search strains by all related name:
rplL b3986 ECK3977 JW3949
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General information (Go to Linear View: )
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Gene Name
|
rplL
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Alternative name
|
b3986,ECK3977,JW3949
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Location, Length
|
4,178,583 - 4,178,948
(
+
)
;
90.06
min
;
366
(bp) ,
121
(aa)
|
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Product
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50S ribosomal subunit protein L7/L12
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Operon Name
|
rplKAJL-rpoBC
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Note
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GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation
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Function
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structural component; Ribosomal proteins - synthesis, modification
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Gene Ontology
|
GO:0003735
;
structural constituent of ribosome ( rplL )
GO:0005515
;
protein binding ( rplL )
GO:0005622
;
intracellular ( rplL )
GO:0005840
;
ribosome ( rplL )
GO:0006412
;
translation ( rplL )
GO:0030529
;
ribonucleoprotein complex ( rplL )
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PID
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1790418
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EC number
(KEGG Pathway)
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
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EcoGene
|
rplL
(
EG10873
)
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Number of removed
|
1 aa cleaved
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
RL7_ECOLI
(
P02392
)
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- Protein name
|
50S ribosomal protein L7/L12
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- Synonyms
|
L8
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- Gene name
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OrderedLocusNames=b3986, c4943, z5559, ECs4909, SF4059, S3676;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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rplL
(
homologous genes of other bacterias
)
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PDB
(database updated :
2007.02.20
)
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PSI-BLAST
|
Chain A, Nmr Structure Of L7 Dimer From E.Coli
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SWISS-PROT
(database updated :
2007.02.20
)
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BLAST
|
50S ribosomal protein L7/L12
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PSI-BLAST
|
50S ribosomal protein L7/L12
|
|
nr
(database updated :
2007.02.20
)
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BLAST
|
50S ribosomal subunit protein L7/L12 [Shigella sonnei Ss046]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
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PROSITE
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CK2_PHOSPHO_SITE
MYRISTYL
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MMBR References
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J Mol Biol. 1987;194(4):609-20.
Transcription products from the rplKAJL-rpoBC gene cluster.
Downing WL, Dennis PP.
(
2443706
)
|
Proc Natl Acad Sci U S A. 1980;77:2124-2128
Bacteriophage vehicle for the direct cloning of Escherichia coli promoter DNA sequences: feedback regulation of the rplJL-rpoBC operon.
Holowachuk, E. W., J. D. Friesen, and N. Fiil.
|
J Bacteriol. 1982;152(3):1022-32.
Insertions of transposon Tn5 into ribosomal protein PNA polymerase operons.
Hui I, Maltman K, Little R, Hastrup S, Johnsen M, Fiil N, Dennis P.
(
6292159
)
|
Proc Natl Acad Sci U S A. 1980;77:3331-3335
Attenuation and processing of RNA from the rplJL-rpoBC transcription unit of Escherichia coli.
Barry, G., C. Squires, and C. L. Squires.
|
Proc Natl Acad Sci U S A. 1979;76:4922-4926
Control features within the rplJL-rpoBC transcription unit of Escherichia coli.
Barry, G., C. L. Squires, and C. Squires.
|
J Bacteriol. 1979;140(2):479-89.
Lambda transducing bacteriophage carrying deletions of the argCBH-rpoBC region of the Escherichia coli chromosome.
Linn T, Goman M, Scaife J.
(
159290
)
|
J Bacteriol. 1981;147(1):25-35.
Transcriptional and post-transcriptional control of ribosomal protein and ribonucleic acid polymerase genes.
Little R, Fiil NP, Dennis PP.
(
7016843
)
|
Mol Gen Genet. 1981;184(3):548-50.
Internal promoters of the rpoBC operon of Escherichia coli.
Ma JC, Newman AJ, Hayward RS.
(
6278264
)
|
Mol Gen Genet. 1980;177(3):527-33.
Cloning of DNA of the rpoBC operon from the chromosome of Escherichia coli K12.
Newman A, Hayward RS.
(
6246404
)
|
J Bacteriol. 1984;158(1):279-85.
Relative activities of the transcriptional regulatory sites in the rplKAJLrpoBC gene cluster of Escherichia coli.
Ralling G, Linn T.
(
6325390
)
|
J Mol Biol. 1991;218(1):23-31.
In vivo analysis of overlapping transcription units in the rplKAJLrpoBC ribosomal protein-RNA polymerase gene cluster of Escherichia coli.
Steward KL, Linn T.
(
1825852
)
|
Mol Gen Genet. 1981;183(2):277-82.
In vivo synthesis of a polycistronic messenger RNA for the ribosomal proteins L11, L1, L10 and L7/12 in Escherichia coli.
Bruckner R, Matzura H.
(
7035827
)
|
J Bacteriol. 1980;144(3):904-16.
Characterization of promoter-cloning plasmids: analysis of operon structure in the rif region of Escherichia coli and isolation of an enhanced internal promoter mutant.
An G, Friesen JD.
(
7002914
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MSITKDQIIE AVAAMSVMDV VELISAMEEK FGVSAAAAVA VAAGPVEAAE EKTEFDVILK AAGANKVAVI
0071 KAVRGATGLG LKEAKDLVES APAALKEGVS KDDAEALKKA LEEAGAEVEV K
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GGCTGCTGTA CGCGATGCGA AAGAAGCTGC
-070 TTAATCGCAG TTATCTTTTT AACGCATTCG CTTACGTATA AACTTATTCT GATATTCAGG AACAATTTAA
0001 atgtctatca ctaaagatca aatcattgaa gcagttgcag ctatgtctgt aatggacgtt gtagaactga
0071 tctctgcaat ggaagaaaaa ttcggtgttt ccgctgctgc tgctgtagct gtagctgctg gcccggttga
0141 agctgctgaa gaaaaaactg aattcgacgt aattctgaaa gctgctggcg ctaacaaagt tgctgttatc
0211 aaagcagtac gtggcgcaac tggcctgggt ctgaaagaag ctaaagacct ggtagaatct gcaccggctg
0281 ctctgaaaga aggcgtgagc aaagacgacg cagaagcact gaaaaaagct ctggaagaag ctggcgctga
0351 agttgaagtt aaataaGCCA ACCCTTCCGG TTGCAGCCTG AGAAATCAGG CTGATGGCTG GTGACTTTTT
0421 AGTCACCAGC CTTTTTGCGC TGTAAGGCGC CAGTAGCGTT TCACAC
|
