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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
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Deletion
|
OCR10,11-11 (AK1-16 / BK2-16)
(D)
,
OCR10,11-16 (BK5-16 / AK7-16)
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
rplK
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Related strains
|
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Strains Search
|
Search strains by gene name:
rplK
Search strains by all related name:
rplK b3983 ECK3974 JW3946 o142 relC
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General information (Go to Linear View: )
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Gene Name
|
rplK
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Alternative name
|
b3983,ECK3974,JW3946,o142,relC
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Location, Length
|
4,176,470 - 4,176,898
(
+
)
;
90.02
min
;
429
(bp) ,
142
(aa)
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Product
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50S ribosomal subunit protein L11
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Operon Name
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rplKAJL-rpoBC
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Note
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GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation
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Function
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structural component; Ribosomal proteins - synthesis, modification
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Gene Ontology
|
GO:0003723
;
RNA binding ( rplK )
GO:0003735
;
structural constituent of ribosome ( rplK )
GO:0005515
;
protein binding ( rplK )
GO:0005622
;
intracellular ( rplK )
GO:0005840
;
ribosome ( rplK )
GO:0006412
;
translation ( rplK )
GO:0019843
;
rRNA binding ( rplK )
GO:0030529
;
ribonucleoprotein complex ( rplK )
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PID
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2367334
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EC number
(KEGG Pathway)
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
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EcoGene
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rplK
(
EG10872
)
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Number of removed
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1 aa cleaved
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
RL11_ECOLI
(
P02409
;
P76778
)
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- Protein name
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50S ribosomal protein L11.
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- Synonyms
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- Gene name
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t3478; ORFNames=STMF1.8;
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MMBR References
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J Mol Biol. 1987;194(4):609-20.
Transcription products from the rplKAJL-rpoBC gene cluster.
Downing WL, Dennis PP.
(
2443706
)
|
J Bacteriol. 1982;152(3):1022-32.
Insertions of transposon Tn5 into ribosomal protein PNA polymerase operons.
Hui I, Maltman K, Little R, Hastrup S, Johnsen M, Fiil N, Dennis P.
(
6292159
)
|
J Bacteriol. 1979;140(2):479-89.
Lambda transducing bacteriophage carrying deletions of the argCBH-rpoBC region of the Escherichia coli chromosome.
Linn T, Goman M, Scaife J.
(
159290
)
|
J Bacteriol. 1981;147(1):25-35.
Transcriptional and post-transcriptional control of ribosomal protein and ribonucleic acid polymerase genes.
Little R, Fiil NP, Dennis PP.
(
7016843
)
|
Nucleic Acids Symp Ser. 1995;114:70-72.
Mutations at three sites in the Escherichia coli 23S ribosomal RNA binding region for protein L11 cause UGA-specific suppression and conditional lethality.
Murgola, E. J., W. Xu, and A. L. Arkov.
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Mol Gen Genet. 1980;177(3):527-33.
Cloning of DNA of the rpoBC operon from the chromosome of Escherichia coli K12.
Newman A, Hayward RS.
(
6246404
)
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Proc Natl Acad Sci U S A. 1979;76:1697-1701
Nucleotide sequence of the ribosomal protein gene cluster adjacent to the gene for RNA polymerase subunit beta in Escherichia coli.
Post, L. E., G. D. Strycharz, M. Nomura, H. Lewis, and P. P. Dennis.
|
J Bacteriol. 1984;158(1):279-85.
Relative activities of the transcriptional regulatory sites in the rplKAJLrpoBC gene cluster of Escherichia coli.
Ralling G, Linn T.
(
6325390
)
|
J Mol Biol. 1991;218(1):23-31.
In vivo analysis of overlapping transcription units in the rplKAJLrpoBC ribosomal protein-RNA polymerase gene cluster of Escherichia coli.
Steward KL, Linn T.
(
1825852
)
|
Gene. 1979;6(4):331-65.
Escherichia coli RNA polymerase binding and initiation of transcription on fragments of lambda rifd 18 DNA containing promoters for lambda genes and for rrnB, tufB, rplC,A, rplJ,L, and rpoB,C genes.
Taylor WE, Burgess RR.
(
159206
)
|
Nucleic Acids Res. 1987;15:3085-3096
Translational regulation of the L11 ribosomal protein operon of Escherichia coli: mutations that define the target site for repression by L1.
Thomas, M. S., and M. Nomura.
|
Mol Gen Genet. 1981;183(2):277-82.
In vivo synthesis of a polycistronic messenger RNA for the ribosomal proteins L11, L1, L10 and L7/12 in Escherichia coli.
Bruckner R, Matzura H.
(
7035827
)
|
J Bacteriol. 1980;144(3):904-16.
Characterization of promoter-cloning plasmids: analysis of operon structure in the rif region of Escherichia coli and isolation of an enhanced internal promoter mutant.
An G, Friesen JD.
(
7002914
)
|
J Bacteriol. 1978;136(3):994-1001.
Kasugamycin-dependent mutants of Escherichia coli.
Dabbs ER.
(
363701
)
|
Mol Gen Genet. 1977;150(3):293-9.
A new technique for selection of sensitive and auxotrophic mutants of E. coli: isolation of a strain sensitive to an excess of one-carbon metabolites.
Danchin A.
(
321938
)
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| Sequences |
Amino acid
FASTA format
|
0001 MAKKVQAYVK LQVAAGMANP SPPVGPALGQ QGVNIMEFCK AFNAKTDSIE KGLPIPVVIT VYADRSFTFV
0071 TKTPPAAVLL KKAAGIKSGS GKPNKDKVGK ISRAQLQEIA QTKAADMTGA DIEAMTRSIE GTARSMGLVV
0141 ED
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATTTCGCGCC TTTTGTTTTT ATGGGCCTTG
-070 CCCGTAAAAC GATTTTTTAT ATCACGGGGA GCCTCTCAGA GGCGTTATTA CCCAACTTGA GGAATTTATA
0001 atggctaaga aagtacaagc ctatgtcaag ctgcaggttg cagctggtat ggctaacccg agtccgccag
0071 taggtccggc tctgggtcag cagggcgtaa acatcatgga attctgcaaa gcgttcaacg caaaaactga
0141 ttccatcgaa aaaggtctgc cgattccggt agtaatcacc gtttacgctg accgttcttt cactttcgtt
0211 accaagaccc cgccggcagc agttctgctg aaaaaagcgg ctggtatcaa gtctggttcc ggtaagccga
0281 acaaagacaa agtgggtaaa atttcccgcg ctcagctgca ggaaatcgcg cagaccaaag ctgccgacat
0351 gactggtgcc gacattgaag cgatgactcg ctccatcgaa ggtactgcac gttccatggg cctggtagtg
0421 gaggactaaG AAATGGCTAA ACTGACCAAG CGCATGCGTG TTATCCGCGA GAAAGTTGAT GCAACCAAAC
0491 AGTACGACAT CAACGAAGCT ATCGCACTGC TGAAAGAGC
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