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PEC Original Annotations
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|
Essentiality
|
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Class
|
non-essential
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References (PMID)
|
|
|
Deletion
|
OCR07
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
rhaM
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
rhaM
Search strains by all related name:
rhaM b3901 ECK3894 f104 JW3872 yiiL
|
General information (Go to Linear View: )
|
|
Gene Name
|
rhaM
|
|
Alternative name
|
b3901,ECK3894,f104,JW3872,yiiL
|
|
Location, Length
|
4,091,147 - 4,091,461
(
-
)
;
88.18
min
;
315
(bp) ,
104
(aa)
|
|
Product
|
L-rhamnose mutarotase
|
|
Operon Name
|
rhaM
|
|
Note
|
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Function
|
|
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Gene Ontology
|
GO:0005515
;
protein binding ( yiiL )
|
|
PID
|
1790335
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YIIL_ECOLI
(
P32156
)
|
|
- Protein name
|
Hypothetical protein yiiL.
|
|
- Synonyms
|
|
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- Gene name
|
Name=yiiL; OrderedLocusNames=b3901;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yiiL
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of E. Coli Yiil Protein Containing L- Rhamnose
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yiiL
|
|
PSI-BLAST
|
Hypothetical protein yiiL
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
L-rhamnose mutarotase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MIRKAFVMQV NPDAHEEYQR RHNPIWPELE AVLKSHGAHN YAIYLDKARN LLFAMVEIES EERWNAVAST
0071 DVCQRWWKYM TDVMPANPDN SPVSSELQEV FYLP
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cggcatgaaa cagaccatca gccgtgaaga
-070 gttgatagcg ctcggcaagc gtttcggcgt tacgccactc gccagtgcgc tggcgctgta aggagcaaac
0001 atgatccgca aagcctttgt catgcaggta aaccccgacg cccacgaaga gtatcagcgt cggcataatc
0071 ccatctggcc agaactggaa gcagtgctga aatctcacgg tgcgcataac tacgccatct atctcgacaa
0141 agcgcgtaat ctgctgtttg ccatggtaga gattgaatct gaagaacgct ggaatgcggt tgccagcact
0211 gatgtttgcc aacgttggtg gaaatatatg accgatgtta tgcccgctaa cccggataac agcccggtga
0281 gtagcgagct gcaagaagtg ttttacctgc cgtaattgcc caatgtgcca gagatgcctc cggcacaata
0351 ttttaaattt cgatttgaaa aattaaacat attacatctc ccggtaagtt atatttccct gatac
|
