|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR06-7
(D)
,
LD3-9-2
(LD)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yihS
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yihS
Search strains by all related name:
yihS b3880 ECK3873 f418 JW5569 manC?
|
General information (Go to Linear View: )
|
|
Gene Name
|
yihS
|
|
Alternative name
|
b3880,ECK3873,f418,JW5569,manC?
|
|
Location, Length
|
4,068,538 - 4,069,779
(
-
)
;
87.69
min
;
1242
(bp) ,
413
(aa)
|
|
Product
|
aldose-ketose isomerase; D-mannose isomerase
|
|
Operon Name
|
yihUTS
|
|
Note
|
|
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Function
|
|
|
Gene Ontology
|
GO:0003824
;
catalytic activity ( yihS )
GO:0004476
;
mannose-6-phosphate isomerase activity ( yihS )
GO:0006013
;
mannose metabolic process ( yihS )
GO:0016853
;
isomerase activity ( yihS )
|
|
PID
|
87082342
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YIHS_ECOLI
(
P32140
)
|
|
- Protein name
|
Hypothetical sugar isomerase yihS
|
|
- Synonyms
|
EC 5.-.-.-
|
|
- Gene name
|
Name=yihS; OrderedLocusNames=b3880;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yihS
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of Putative Nag Isomerase From Salmonella Typhimurium
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical sugar isomerase yihS
|
|
PSI-BLAST
|
Hypothetical sugar isomerase yihS
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
ORF_f418 [Escherichia coli]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MKWFNTLSHN RWLEQETDRI FDFGKNSVVP TGFGWLGNKG QIKEEMGTHL WITARMLHVY SVAAAMGRPG
0071 AYSLVDHGIK AMNGALRDKK YGGWYACVND EGVVDASKQG YQHFFALLGA ASAVTTGHPE ARKLLDYTIE
0141 IIEKYFWSEE EQMCLESWDE AFSKTEEYRG GNANMHAVEA FLIVYDVTHD KKWLDRAIRV ASVIIHDVAR
0211 NNHYRVNEHF DTQWNPLPDY NKDNPAHRFR AFGGTPGHWI EWGRLMLHIH AALEARCEQP PAWLLEDAKG
0281 LFNATVRDAW APDGADGIVY TVDWEGKPVV RERVRWPIVE AMGTAYALYT VTGDRQYETW YQTWWEYCIK
0351 YLMDYENGSW WQELDADNKV TTKVWDGKQD IYHLLHCLVI PRIPLAPGMA PAVAAGLLDI NAK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gagctgatgc tgcgtgacgt ttgcgcaccg
-070 aaattacaac aacttggcga tatcgtcgac gaaatgatgg ctaaacgccg ctaagatgag gataaaagga
0001 atgaaatggt ttaacaccct aagccacaac cgttggctgg aacaggaaac cgaccgcatc tttgattttg
0071 gtaaaaattc cgtagtgccg actggttttg gctggttagg caataaaggg caaatcaaag aagagatggg
0141 cacccatctg tggatcaccg ctcgtatgtt gcacgtttat tccgttgctg cggcgatggg tcgacctggc
0211 gcttactcgt tggttgatca cggtatcaaa gccatgaacg gcgcactgcg tgataaaaaa tatggcggct
0281 ggtatgcctg cgtgaatgac gagggcgtgg tggatgcctc caaacagggc tatcaacact tctttgctct
0351 gctgggtgcc gccagcgccg tcacaacggg tcacccggaa gcgcgcaagc tgctcgatta caccattgaa
0421 attatcgaga aatatttctg gagcgaagaa gagcagatgt gcctggaatc ctgggacgaa gccttcagca
0491 aaaccgaaga gtaccgcggc ggcaatgcca atatgcacgc ggtggaagct ttcttgattg tttatgacgt
0561 cactcacgac aaaaaatggc tggatcgcgc gattcgcgtg gcttccgtga ttatccacga cgtcgccaga
0631 aataatcatt atcgcgttaa cgaacacttc gatacccagt ggaatccgct gccggattac aacaaagata
0701 acccggcgca tcgcttccgc gcgttcggag gtacaccagg ccactggatc gaatggggcc gtttaatgct
0771 gcacatccat gctgccctgg aagcccgttg cgaacaacca ccagcatggc tgctagaaga tgccaaaggt
0841 ctgtttaacg ccaccgtgcg cgatgcctgg gcacccgatg gcgcggacgg gattgtttat accgttgact
0911 gggaaggaaa accggtggtc cgcgaacgtg tacgttggcc tatcgtcgaa gcaatgggta cggcctacgc
0981 gctctacacc gtcactggcg atcgccagta tgaaacctgg tatcaaacat ggtgggagta ctgcattaag
1051 tacctgatgg actatgaaaa tggttcctgg tggcaggagc tggatgcgga caataaggtc accaccaaag
1121 tctgggacgg caaacaggat atttatcacc tgctgcattg cctggtgatc ccgcgtatcc cgttagcgcc
1191 cggcatggct ccagcggttg cagcgggtct gctggatatt aatgcgaaat aactgatctg aaaatagggt
1261 gcgggttttc ccctctccct aaccctctcc ccaaaggggc gaggggaccg tccggtgcag tttttgggtt
1331 tgacatcagc ct
|
