|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Proc Natl Acad Sci U S A. 1976;73(6):1959-63.
Isolation and characterization of conditional lethal mutants of Escherichia coli defective in transcription termination factor rho.
Das A, Court D, Adhya S.
(
132662
)
|
Mol Microbiol. 2000;37(2):364-70.
'Intergenic' blr gene in Escherichia coli encodes a 41-residue membrane protein affecting intrinsic susceptibility to certain inhibitors of peptidoglycan synthesis.
Wong RS, McMurry LM, Levy SB.
(
10931331
)
|
|
|
Deletion
|
DE(PLK1608)
,
OCL90-3
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
blr
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
blr
Search strains by all related name:
blr b3782 b4409 ECK1620 JW5963 rhoL
|
General information (Go to Linear View: )
|
|
Gene Name
|
blr
|
|
Alternative name
|
b3782,b4409,ECK1620,JW5963,rhoL
|
|
Location, Length
|
1,702,575 - 1,702,700
(
+
)
;
36.70
min
;
126
(bp) ,
41
(aa)
|
|
Product
|
beta-lactam resistance membrane protein; divisome-associated protein
|
|
Operon Name
|
blr
|
|
Note
|
beta-lactam resistance protein
|
|
Function
|
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( blr )
GO:0016020
;
membrane ( blr )
GO:0016021
;
integral to membrane ( blr )
GO:0046677
;
response to antibiotic ( blr )
|
|
PID
|
48994886
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
LPRH_ECOLI
(
P37324
)
|
|
- Protein name
|
Very hypothetical rho operon leader peptide.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=rhoL; OrderedLocusNames=b3782, c5501, SF3855, S3904;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
rhoL
(
homologous genes of other bacterias
)
blr
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Very hypothetical rho operon leader peptide
|
|
PSI-BLAST
|
Very hypothetical rho operon leader peptide
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
rho operon leader peptide [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
|
| Sequences |
Amino acid
FASTA format
|
0001 MNRLIELTGW IVLVVSVILL GVASHIDNYQ PPEQSASVQH K
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TATCGCAAAA ACCTCAGTAA AAATCTTGCT
-070 GGAGCTATTA TTGCTAAGTA ACATTTACCC CCTGAAGTTA ATGGATCAAT CAAGAGAGAT GTGGGCTGTA
0001 atgaatcgtc ttattgaatt aacaggttgg atcgttcttg tcgtttcagt cattcttctt ggcgtggcga
0071 gtcacattga caactatcag ccacctgaac agagtgcttc ggtacaacac aagtaaGCTC TGCACTTGTG
0141 GAGCGACATG CTGCCCGTCC GGGTGCATGT TTTCACTTGT CGGATATTAA ACCAGGAATT TATTATCTTG
0211 TTCGATGTTG TTGGTG
|
