|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCL01
(D)
,
OCL01-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
atpF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
atpF
Search strains by all related name:
atpF b3736 ECK3729 f156 JW3714 papF uncF
|
General information (Go to Linear View: )
|
|
Gene Name
|
atpF
|
|
Alternative name
|
b3736,ECK3729,f156,JW3714,papF,uncF
|
|
Location, Length
|
3,918,441 - 3,918,911
(
-
)
;
84.46
min
;
471
(bp) ,
156
(aa)
|
|
Product
|
F0 sector of membrane-bound ATP synthase, subunit b
|
|
Operon Name
|
atpIBEFHAGDC
|
|
Note
|
membrane-bound ATP synthase, F0 sector, subunit b; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0015986 - ATP synthesis coupled proton transport
|
|
Function
|
enzyme; ATP-proton motive force interconversion
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( atpF )
GO:0006810
;
transport ( atpF )
GO:0006811
;
ion transport ( atpF )
GO:0015078
;
hydrogen ion transmembrane transporter activity ( atpF )
GO:0015986
;
ATP synthesis coupled proton transport ( atpF )
GO:0015992
;
proton transport ( atpF )
GO:0016020
;
membrane ( atpF )
GO:0016021
;
integral to membrane ( atpF )
GO:0016469
;
proton-transporting two-sector ATPase complex ( atpF )
GO:0016820
;
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances ( atpF )
GO:0045263
;
proton-transporting ATP synthase complex, coupling factor F(o) ( atpF )
GO:0046933
;
hydrogen ion transporting ATP synthase activity, rotational mechanism ( atpF )
GO:0046961
;
hydrogen ion transporting ATPase activity, rotational mechanism ( atpF )
|
|
PID
|
1790174
|
EC number
(KEGG Pathway)
|
3.6.3.14
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
atpF
(
EG10103
)
|
|
Number of removed
|
0 aa cleaved
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
ATPF_ECOLI
(
P00859
)
|
|
- Protein name
|
ATP synthase B chain
|
|
- Synonyms
|
EC 3.6.3.14
|
|
- Gene name
|
OrderedLocusNames=b3736, c4664, z5234, ECs4678, SF3816, S3952;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
atpF
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Membrane Domain Of The Subunit B Of The E.Coli Atp Synthase
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
ATP synthase B chain
|
|
PSI-BLAST
|
ATP synthase B chain
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
ATP synthase subunit B [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
Proc Natl Acad Sci U S A. 1982;79:320-324
Gene order and gene-polypeptide relationships of the proton-translocating ATPase operon (unc) of Escherichia coli.
Gunsalus, R. P., W. S. Brusilow, and R. D. Simoni.
|
J Bacteriol. 1992;174:3370-3376
Effects of inducing expression of cloned genes for the F0 proton channel of the Escherichia coli F1F0 ATPase.
Monticello, R. A., E. Angov, and W. S. A. Brusilow.
|
Biochem J. 1984;224(3):799-815.
DNA sequence around the Escherichia coli unc operon. Completion of the sequence of a 17 kilobase segment containing asnA, oriC, unc, glmS and phoS.
Walker JE, Gay NJ, Saraste M, Eberle AN.
(
6395859
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MNLNATILGQ AIAFVLFVLF CMKYVWPPLM AAIEKRQKEI ADGLASAERA HKDLDLAKAS ATDQLKKAKA
0071 EAQVIIEQAN KRRSQILDEA KAEAEQERTK IVAQAQAEIE AERKRAREEL RKQVAILAVA GAEKIIERSV
0141 DEAANSDIVD KLVAEL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gtaggtctgg gtctgtacgt gatgttcgct
-070 gtcgcgtagt aagcgttgct tttatttaaa gagcaatatc agaacgttaa ctaaatagag gcattgtgct
0001 gtgaatctta acgcaacaat cctcggccag gccatcgcgt ttgtcctgtt cgttctgttc tgcatgaagt
0071 acgtatggcc gccattaatg gcagccatcg aaaaacgtca aaaagaaatt gctgacggcc ttgcttccgc
0141 agaacgagca cataaggacc ttgaccttgc aaaggccagc gcgaccgacc agctgaaaaa agcgaaagcg
0211 gaagcccagg taatcatcga gcaggcgaac aaacgccgct cgcagattct ggacgaagcg aaagctgagg
0281 cagaacagga acgtactaaa atcgtggccc aggcgcaggc ggaaattgaa gccgagcgta aacgtgcccg
0351 tgaagagctg cgtaagcaag ttgctatcct ggctgttgct ggcgccgaga agatcatcga acgttccgtg
0421 gatgaagctg ctaacagcga catcgtggat aaacttgtcg ctgaactgta aggagggagg ggctgatgtc
0491 tgaatttatt acggtagctc gcccctacgc caaagcagct tttgactttg ccgtcgaaca ccaaagtgta
0561 gaacgctggc a
|
