|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCL01
(D)
,
OCL01-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
atpH
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
atpH
Search strains by all related name:
atpH b3735 ECK3728 JW3713 papE uncH
|
General information (Go to Linear View: )
|
|
Gene Name
|
atpH
|
|
Alternative name
|
b3735,ECK3728,JW3713,papE,uncH
|
|
Location, Length
|
3,917,893 - 3,918,426
(
-
)
;
84.44
min
;
534
(bp) ,
177
(aa)
|
|
Product
|
F1 sector of membrane-bound ATP synthase, delta subunit
|
|
Operon Name
|
atpIBEFHAGDC
|
|
Note
|
membrane-bound ATP synthase, F1 sector, delta-subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0015986 - ATP synthesis coupled proton transport
|
|
Function
|
enzyme; ATP-proton motive force interconversion
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( atpH )
GO:0006754
;
ATP biosynthetic process ( atpH )
GO:0006810
;
transport ( atpH )
GO:0006811
;
ion transport ( atpH )
GO:0015078
;
hydrogen ion transmembrane transporter activity ( atpH )
GO:0015986
;
ATP synthesis coupled proton transport ( atpH )
GO:0015992
;
proton transport ( atpH )
GO:0016020
;
membrane ( atpH )
GO:0016469
;
proton-transporting two-sector ATPase complex ( atpH )
GO:0016787
;
hydrolase activity ( atpH )
GO:0045261
;
proton-transporting ATP synthase complex, catalytic core F(1) ( atpH )
GO:0046872
;
metal ion binding ( atpH )
GO:0046933
;
hydrogen ion transporting ATP synthase activity, rotational mechanism ( atpH )
GO:0046961
;
hydrogen ion transporting ATPase activity, rotational mechanism ( atpH )
|
|
PID
|
1790173
|
EC number
(KEGG Pathway)
|
3.6.3.14
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
atpH
(
EG10105
)
|
|
Number of removed
|
1 aa cleaved
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
ATPD_ECOLI
(
P00831
)
|
|
- Protein name
|
ATP synthase delta chain
|
|
- Synonyms
|
EC 3.6.3.14
|
|
- Gene name
|
OrderedLocusNames=b3735, z5233, ECs4677;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
atpH
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain , N-Terminal Domain Of The Delta Subunit Of The F1f0-Atp Synthase From Escherichia Coli, Nmr, Minimized Average Structure
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
ATP synthase delta chain
|
|
PSI-BLAST
|
ATP synthase delta chain
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
ATP synthase subunit D [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
ATPASE_DELTA
|
|
MMBR References
|
Proc Natl Acad Sci U S A. 1982;79:320-324
Gene order and gene-polypeptide relationships of the proton-translocating ATPase operon (unc) of Escherichia coli.
Gunsalus, R. P., W. S. Brusilow, and R. D. Simoni.
|
J Bacteriol. 1994;176:1383-1389
Role of the delta subunit in enhancing proton conduction through the F0 of the Escherichia coli F1F0 ATPase.
Monticello, R. A., and W. S. A. Brusilow.
|
Mol Microbiol. 1992;6(23):3559-66.
Regulation of the Escherichia coli uncH gene by mRNA secondary structure and translational coupling.
Pati S, DiSilvestre D, Brusilow WS.
(
1282193
)
|
Biochem J. 1984;224(3):799-815.
DNA sequence around the Escherichia coli unc operon. Completion of the sequence of a 17 kilobase segment containing asnA, oriC, unc, glmS and phoS.
Walker JE, Gay NJ, Saraste M, Eberle AN.
(
6395859
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MSEFITVARP YAKAAFDFAV EHQSVERWQD MLAFAAEVTK NEQMAELLSG ALAPETLAES FIAVCGEQLD
0071 ENGQNLIRVM AENGRLNALP DVLEQFIHLR AVSEATAEVD VISAAALSEQ QLAKISAAME KRLSRKVKLN
0141 CKIDKSVMAG VIIRAGDMVI DGSVRGRLER LADVLQS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttgctggcgc cgagaagatc atcgaacgtt
-070 ccgtggatga agctgctaac agcgacatcg tggataaact tgtcgctgaa ctgtaaggag ggaggggctg
0001 atgtctgaat ttattacggt agctcgcccc tacgccaaag cagcttttga ctttgccgtc gaacaccaaa
0071 gtgtagaacg ctggcaggac atgctggcgt ttgccgccga ggtaaccaaa aacgaacaaa tggcagagct
0141 tctctctggc gcgcttgcgc cagaaacgct cgccgagtcg tttatcgcag tttgtggtga gcaactggac
0211 gaaaacggtc agaacctgat tcgggttatg gctgaaaatg gtcgtcttaa cgcgctcccg gatgttctgg
0281 agcagtttat tcacctgcgt gccgtgagtg aggctaccgc tgaggtagac gtcatttccg ctgccgcact
0351 gagtgaacaa cagctcgcga aaatttctgc tgcgatggaa aaacgtctgt cacgcaaagt taagctgaat
0421 tgcaaaatcg ataagtctgt aatggcaggc gttatcatcc gagcgggtga tatggtcatt gatggcagcg
0491 tacgcggtcg tcttgagcgc cttgcagacg tcttgcagtc ttaaggggac tggagcatgc aactgaattc
0561 caccgaaatc agcgaactga tcaagcagcg cattgctcag ttcaatgttg tgagtgaagc tcacaacgaa
0631 ggta
|
