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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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J Biol Chem. 1986;261(12):5245-8.
Complementation of mutants in the Escherichia coli proton-translocating ATPase by cloned DNA from Bacillus megaterium.
Hawthorne CA, Brusilow WS.
(
2870065
)
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Deletion
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OCL01
(D)
,
OCL01-1
(D)
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Related gene (W3110 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
atpD
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Related strains
|
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Strains Search
|
Search strains by gene name:
atpD
Search strains by all related name:
atpD b3732 ECK3725 JW3710 papB uncD
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General information (Go to Linear View: )
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Gene Name
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atpD
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Alternative name
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b3732,ECK3725,JW3710,papB,uncD
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Location, Length
|
3,914,016 - 3,915,398
(
-
)
;
84.36
min
;
1383
(bp) ,
460
(aa)
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Product
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F1 sector of membrane-bound ATP synthase, beta subunit
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Operon Name
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atpIBEFHAGDC
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Note
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membrane-bound ATP synthase, F1 sector, beta-subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0015986 - ATP synthesis coupled proton transport
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Function
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enzyme; ATP-proton motive force interconversion
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Gene Ontology
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GO:0000166
;
nucleotide binding ( atpD )
GO:0005515
;
protein binding ( atpD )
GO:0005524
;
ATP binding ( atpD )
GO:0005737
;
cytoplasm ( atpD )
GO:0005886
;
plasma membrane ( atpD )
GO:0006754
;
ATP biosynthetic process ( atpD )
GO:0006810
;
transport ( atpD )
GO:0006811
;
ion transport ( atpD )
GO:0008553
;
hydrogen-exporting ATPase activity, phosphorylative mechanism ( atpD )
GO:0015078
;
hydrogen ion transmembrane transporter activity ( atpD )
GO:0015986
;
ATP synthesis coupled proton transport ( atpD )
GO:0015992
;
proton transport ( atpD )
GO:0016020
;
membrane ( atpD )
GO:0016021
;
integral to membrane ( atpD )
GO:0016469
;
proton-transporting two-sector ATPase complex ( atpD )
GO:0016787
;
hydrolase activity ( atpD )
GO:0017111
;
nucleoside-triphosphatase activity ( atpD )
GO:0042777
;
plasma membrane ATP synthesis coupled proton transport ( atpD )
GO:0045261
;
proton-transporting ATP synthase complex, catalytic core F(1) ( atpD )
GO:0046872
;
metal ion binding ( atpD )
GO:0046933
;
hydrogen ion transporting ATP synthase activity, rotational mechanism ( atpD )
GO:0046961
;
hydrogen ion transporting ATPase activity, rotational mechanism ( atpD )
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PID
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1790170
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EC number
(KEGG Pathway)
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3.6.3.14
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
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EcoGene
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atpD
(
EG10101
)
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Number of removed
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1 aa cleaved
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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ATPB_ECOLI
(
P00824
)
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- Protein name
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ATP synthase beta chain
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- Synonyms
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EC 3.6.3.14
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- Gene name
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OrderedLocusNames=b3732, c4658, z5230, ECs4674, SF3812, S3956;
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MMBR References
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Proc Natl Acad Sci U S A. 1982;79:320-324
Gene order and gene-polypeptide relationships of the proton-translocating ATPase operon (unc) of Escherichia coli.
Gunsalus, R. P., W. S. Brusilow, and R. D. Simoni.
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J Biol Chem. 1995;270:25656-25660
Beta subunit Glu-185 of Escherichia coli H(+)-ATPase (ATP synthase) is an essential residue for cooperative catalysis.
Omote, H., N. P. Le, M. Y. Park, M. Maeda, and M. Futai.
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Biochem J. 1984;224(3):799-815.
DNA sequence around the Escherichia coli unc operon. Completion of the sequence of a 17 kilobase segment containing asnA, oriC, unc, glmS and phoS.
Walker JE, Gay NJ, Saraste M, Eberle AN.
(
6395859
)
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| Sequences |
Amino acid
FASTA format
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0001 MATGKIVQVI GAVVDVEFPQ DAVPRVYDAL EVQNGNERLV LEVQQQLGGG IVRTIAMGSS DGLRRGLDVK
0071 DLEHPIEVPV GKATLGRIMN VLGEPVDMKG EIGEEERWAI HRAAPSYEEL SNSQELLETG IKVIDLMCPF
0141 AKGGKVGLFG GAGVGKTVNM MELIRNIAIE HSGYSVFAGV GERTREGNDF YHEMTDSNVI DKVSLVYGQM
0211 NEPPGNRLRV ALTGLTMAEK FRDEGRDVLL FVDNIYRYTL AGTEVSALLG RMPSAVGYQP TLAEEMGVLQ
0281 ERITSTKTGS ITSVQAVYVP ADDLTDPSPA TTFAHLDATV VLSRQIASLG IYPAVDPLDS TSRQLDPLVV
0351 GQEHYDTARG VQSILQRYQE LKDIIAILGM DELSEEDKLV VARARKIQRF LSQPFFVAEV FTGSPGKYVS
0421 LKDTIRGFKG IMEGEYDHLP EQAFYMVGSI EEAVEKAKKL
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tatacaacaa agctcgtcag gccagcatta
-070 ctcaggaact caccgagatc gtctcggggg ccgccgcggt ttaaacaggt tatttcgtag aggatttaag
0001 atggctactg gaaagattgt ccaggtaatc ggcgccgtag ttgacgtcga attccctcag gatgccgtac
0071 cgcgcgtgta cgatgctctt gaggtgcaaa atggtaatga gcgtctggtg ctggaagttc agcagcagct
0141 cggcggcggt atcgtacgta ccatcgcaat gggttcctcc gacggtctgc gtcgcggtct ggatgtaaaa
0211 gacctcgaac acccgattga agtcccggta ggtaaagcga ctctgggccg tatcatgaac gtactgggtg
0281 aaccggtcga catgaaaggc gagatcggtg aagaagagcg ttgggcgatt caccgcgcag caccttccta
0351 cgaagagctg tcaaactctc aggaactgct ggaaaccggt atcaaagtta tcgacctgat gtgtccgttc
0421 gctaagggcg gtaaagttgg tctgttcggt ggtgcgggtg taggtaaaac cgtaaacatg atggagctca
0491 ttcgtaacat cgcgatcgag cactccggtt actctgtgtt tgcgggcgta ggtgaacgta ctcgtgaggg
0561 taacgacttc taccacgaaa tgaccgactc caacgttatc gacaaagtat ccctggtgta tggccagatg
0631 aacgagccgc cgggaaaccg tctgcgcgtt gctctgaccg gtctgaccat ggctgagaaa ttccgtgacg
0701 aaggtcgtga cgttctgctg ttcgttgaca acatctatcg ttacaccctg gccggtacgg aagtatccgc
0771 actgctgggc cgtatgcctt cagcggtagg ttatcagccg accctggcgg aagagatggg cgttctgcag
0841 gaacgtatca cctccaccaa aactggttct atcacctccg tacaggcagt atacgtacct gcggatgact
0911 tgactgaccc gtctccggca accacctttg cgcaccttga cgcaaccgtg gtactgagcc gtcagatcgc
0981 gtctctgggt atctacccgg ccgttgaccc gctggactcc accagccgtc agctggaccc gctggtggtt
1051 ggtcaggaac actacgacac cgcgcgtggc gttcagtcca tcctgcaacg ttatcaggaa ctgaaagaca
1121 tcatcgccat cctgggtatg gatgaactgt ctgaagaaga caaactggtg gtagcgcgtg ctcgtaagat
1191 ccagcgcttc ctgtcccagc cgttcttcgt ggcagaagta ttcaccggtt ctccgggtaa atacgtctcc
1261 ctgaaagaca ccatccgtgg ctttaaaggc atcatggaag gcgaatacga tcacctgccg gagcaggcgt
1331 tctacatggt cggttccatc gaagaagctg tggaaaaagc caaaaaactt taacgcctta atcggagggt
1401 gatatggcaa tgacttacca cctggacgtc gtcagcgcag agcaacaaat gttctctggt ctggtcgaga
1471 aaatccaggt aac
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