|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
9-1
(LD)
,
OCR36,37-6 (LD 9C::Ap)
(D)
,
OCR37
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yaiO
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaiO
Search strains by all related name:
yaiO b0358 ECK0355 f257 f258a JW0349
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaiO
|
|
Alternative name
|
b0358,ECK0355,f257,f258a,JW0349
|
|
Location, Length
|
379,293 - 380,066
(
-
)
;
8.17
min
;
774
(bp) ,
257
(aa)
|
|
Product
|
outer membrane protein
|
|
Operon Name
|
yaiXO
|
|
Note
|
|
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Function
|
|
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Gene Ontology
|
|
|
PID
|
1786555
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAIO_ECOLI
(
Q47534
)
|
|
- Protein name
|
Hypothetical protein yaiO.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaiO; OrderedLocusNames=b0358;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yaiO
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, The Crystal Structure Of Alpha-D-Glucuronidase From Bacillus Stearothermophilus T-6
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yaiO
|
|
PSI-BLAST
|
Hypothetical protein yaiO
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b0358 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
| Sequences |
Amino acid
FASTA format
|
0001 MIKRTLLAAA IFSALPAYAG LTSITAGYDF TDYSGDHGNR NLAYAELVAK VENATLLFNL SQGRRDYETE
0071 HFNATRGQGA VWYKWNNWLT TRTGIAFADN TPVFARQDFR QDINLALLPK TLFTTGYRYT KYYDDVEVDA
0141 WQGGVSLYTG PVITSYRYTH YDSSDAGGSY SNMISVRLND PRGTGYTQLW LSRGTGAYTY DWTPETRYGS
0211 MKSVSLQRIQ PLTEQLNLGL TAGKVWYDTP TDDFNGLQLA ARLTWKF
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tccccgaaca cgcaacttgg cccgcgcgtg
-070 attgtagaac gtaatttacc taccggaact tattcactcc gacaagaact tatccgtaca ggagattaaa
0001 atgataaaac ggacgttatt agcggcggcc atttttagcg cattgcccgc ttatgccggg ttaacttcca
0071 ttaccgcggg ctacgatttt accgattatt ctggcgatca tggcaaccgt aatttagcgt atgctgaact
0141 ggtggcgaaa gttgaaaacg caacgctgct ttttaatctt tcccaggggc gtcgtgatta tgaaactgaa
0211 catttcaatg ccactcgcgg tcagggtgcg gtctggtata aatggaataa ctggctgaca acccgaacgg
0281 gtattgcctt tgcggataat acgccggtct ttgcccgcca ggattttcgt caggatatta acctggccct
0351 gttaccaaaa acgcttttca cgaccggtta tcgctacact aaatattacg atgatgtcga agtcgatgcc
0421 tggcaaggcg gcgtatcact ctatactggc ccggtgatca ccagctaccg ctatacccat tatgactcca
0491 gcgatgcagg tggtagttat agcaatatga tttccgtgcg tctgaatgac ccgcgcggca ctggttatac
0561 gcaactatgg ctaagccgcg gaacaggtgc ttacacctat gactggacgc cagaaacacg ctacggcagc
0631 atgaagagcg tcagtctgca acgtattcaa ccgctgactg agcaacttaa tctcgggctg acggcaggta
0701 aagtgtggta cgacacccca accgatgatt ttaacggtct gcaacttgca gcccgtctga cctggaaatt
0771 ctgattcctt ctgccgcccg ctatccgggg cggccttccc tgccgattag cccccccccc tttcctcttt
0841 gttttccgac cacattcacc ggataaattt tatt
|
