|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
9-1
(LD)
,
OCR36,37-6 (LD 9C::Ap)
(D)
,
OCR37
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
frmR
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
frmR
Search strains by all related name:
frmR b0357 ECK0354 f98 f99a JW0348 yaiN
|
General information (Go to Linear View: )
|
|
Gene Name
|
frmR
|
|
Alternative name
|
b0357,ECK0354,f98,f99a,JW0348,yaiN
|
|
Location, Length
|
378,830 - 379,105
(
-
)
;
8.17
min
;
276
(bp) ,
91
(aa)
|
|
Product
|
regulator protein that represses frmRAB operon
|
|
Operon Name
|
frmRAB
|
|
Note
|
repressor of frmRAB
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
87081725
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YAIN_ECOLI
(
P55756
;
P77584
)
|
|
- Protein name
|
Hypothetical protein yaiN.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaiN; OrderedLocusNames=b0357, c0466;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
frmR
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of Cu
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yaiN
|
|
PSI-BLAST
|
Hypothetical protein yaiN
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative alpha helix chain [Escherichia coli O157:H7 str. Sakai]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MPSTPEEKKK VLTRVRRIRG QIDALERSLE GDAECRAILQ QIAAVRGAAN GLMAEVLESH IRETFDRNDC
0071 YSREVSQSVD DTIELVRAYL K
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gataaatttt attctccagt gttatatact
-070 ataggggggt atgcattgac atatagaata cccccctata gtatattgca tgcagatgat gaggtgcgaa
0001 atgcccagta ctccggaaga gaagaaaaag gtccttactc gagttcgtcg tattcggggg cagattgatg
0071 ctctggaacg gtcgctggag ggtgatgccg aatgccgtgc catactccaa cagatcgctg ccgttcgggg
0141 cgcggctaat gggctgatgg cagaagtgct tgaaagccat atccgggaaa cgtttgaccg aaatgactgc
0211 tacagccgcg aagtcagcca atccgttgac gacactattg aactggttcg tgcctatctt aaatagctga
0281 atctattacc atattgagga agagcgagag atgaaatcac gtgctgccgt tgcatttgct cccggtaaac
0351 cgctggaaat cgttgaaatt gacgtt
|
