|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
9-1
(LD)
,
OCR36,37-6 (LD 9C::Ap)
(D)
,
OCR37
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
frmB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
frmB
Search strains by all related name:
frmB b0355 ECK0352 f277 JW0346 yaiM
|
General information (Go to Linear View: )
|
|
Gene Name
|
frmB
|
|
Alternative name
|
b0355,ECK0352,f277,JW0346,yaiM
|
|
Location, Length
|
376,759 - 377,592
(
-
)
;
8.12
min
;
834
(bp) ,
277
(aa)
|
|
Product
|
S-formylglutathione hydrolase
|
|
Operon Name
|
frmRAB
|
|
Note
|
putative S-formylglutathione hydrolase
|
|
Function
|
enzyme: Formaldehyde degradation
|
|
Gene Ontology
|
GO:0004091
;
carboxylesterase activity ( frmB )
GO:0016787
;
hydrolase activity ( frmB )
|
|
PID
|
1786551
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YAIM_ECOLI
(
P51025
;
P77317
)
|
|
- Protein name
|
Hypothetical protein yaiM.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaiM; OrderedLocusNames=b0355;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
frmB
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Analysis Of Yeast Hypothetical Protein: Yjg8_yeast
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yaiM
|
|
PSI-BLAST
|
Homoserine O-acetyltransferase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted esterase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
SRP54
|
| Sequences |
Amino acid
FASTA format
|
0001 MELIEKHVSF GGWQNMYRHY SQSLKCEMNV GVYLPPKAAN EKLPVLYWLS GLTCNEQNFI TKSGMQRYAA
0071 EHNIIVVAPD TSPRGSHVAD ADRYDLGQGA GFYLNATQAP WNEHYKMYDY IRNELPDLVM HHFPATAKKS
0141 ISGHSMGGLG ALVLALRNPD EYVSVSAFSP IVSPSQVPWG QQAFAAYLAE NKDAWLDYDP VSLISQGQRV
0211 AEIMVDQGLS DDFYAEQLRT PNLEKICQEM NIKTLIRYHE GYDHSYYFVS SFIGEHIAYH ANKLNMR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttactgattt cccgcaggtt taccccgtcc
-070 acttcaggcg ggggttctta atactctccc cgggcagccg tccgggggat taaccctgag ataatgactg
0001 atggaactca ttgaaaaaca tgtcagcttt ggcggctggc aaaatatgta tcggcattat tcccaatcac
0071 tgaaatgtga aatgaatgtc ggcgtctatc tcccaccaaa agccgcgaat gaaaaattgc cggtgctgta
0141 ctggctttca ggcctgacct gcaacgagca gaatttcatt actaaatcgg ggatgcagcg ttacgcggct
0211 gagcacaaca ttattgttgt tgcgccggac accagtccgc gaggcagtca tgtcgcagat gctgaccgtt
0281 acgatctcgg gcaaggtgcc gggttttacc tgaacgcgac gcaagcgccg tggaatgaac attacaaaat
0351 gtatgactat atccgcaacg agctgccgga tttagtgatg catcattttc cggcaacggc caaaaagtct
0421 atctctggtc attctatggg cgggctgggc gcgctggtgc tggcgttacg taacccagat gaatatgtca
0491 gcgtctcggc gttttcgccc attgtctccc catcgcaagt gccgtgggga cagcaagcct ttgctgcata
0561 tcttgctgaa aataaagatg cctggttgga ttacgacccg gtgagtctta tttcacaagg tcaacgcgtt
0631 gcggaaatca tggttgatca ggggttgagt gatgattttt acgcagaaca gctgcggact ccaaatcttg
0701 aaaagatctg ccaggagatg aatatcaaga cgttaatccg ttatcacgag ggttatgatc acagctatta
0771 ttttgtctcc agttttattg gcgagcatat tgcctaccac gccaataaac tgaatatgcg ttgataatag
0841 cacgactgcc ggatgcggcg tgaacgcctt atccggccta cacttcgccc gtaagccgta ggcctgataa
0911 gacgcgcaaa gcgtcgcatc aggc
|
