|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
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|
|
Deletion
|
2-2
(LD)
,
OCL09,11-1 (LD 2-2'_CRS)
(D)
,
OCL09,11-2 (LD 2-2'_P/O)
(D)
,
OCL10
(D)
,
OCL11
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
xylG
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
xylG
Search strains by all related name:
xylG b3567 ECK3556 JW3539 o513
|
General information (Go to Linear View: )
|
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Gene Name
|
xylG
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Alternative name
|
b3567,ECK3556,JW3539,o513
|
|
Location, Length
|
3,730,224 - 3,731,765
(
+
)
;
80.40
min
;
1542
(bp) ,
513
(aa)
|
|
Product
|
fused D-xylose transporter subunits of ABC superfamily: ATP-binding components
|
|
Operon Name
|
xylFGHR
|
|
Note
|
putative ATP-binding protein of xylose transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process
|
|
Function
|
transport; Sugar metabolism
|
|
Gene Ontology
|
GO:0000166
;
nucleotide binding ( xylG )
GO:0005351
;
sugar:hydrogen ion symporter activity ( xylG )
GO:0005524
;
ATP binding ( xylG )
GO:0005886
;
plasma membrane ( xylG )
GO:0006810
;
transport ( xylG )
GO:0008643
;
carbohydrate transport ( xylG )
GO:0015407
;
monosaccharide-transporting ATPase activity ( xylG )
GO:0015614
;
D-xylose-importing ATPase activity ( xylG )
GO:0015753
;
D-xylose transport ( xylG )
GO:0016020
;
membrane ( xylG )
GO:0016787
;
hydrolase activity ( xylG )
GO:0016887
;
ATPase activity ( xylG )
GO:0017111
;
nucleoside-triphosphatase activity ( xylG )
|
|
PID
|
1789991
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
XYLG_ECOLI
(
P37388
)
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- Protein name
|
D-xylose transport ATP-binding protein xylG.
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- Synonyms
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- Gene name
|
Name=xylG; OrderedLocusNames=b3567;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
xylG
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Rnase-L Inhibitor
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Xylose import ATP-binding protein xylG
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|
PSI-BLAST
|
Xylose import ATP-binding protein xylG
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
fused D-xylose transporter subunits of ABC superfamily: ATP-binding components [Escherichia coli K12]
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Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
ATP_GTP_A
LEUCINE_ZIPPER
ABC_TRANSPORTER
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MMBR References
|
Nucleic Acids Res. 1994;22:2576-2586
Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes.
Sofia, H. J., V. D. Burland, D. L. Daniels, G. Plunkett, and F. R. Blattner.
|
| Sequences |
Amino acid
FASTA format
|
0001 MPYLLEMKNI TKTFGSVKAI DNVCLRLNAG EIVSLCGENG SGKSTLMKVL CGIYPHGSYE GEIIFAGEEI
0071 QASHIRDTER KGIAIIHQEL ALVKELTVLE NIFLGNEITH NGIMDYDLMT LRCQKLLAQV SLSISPDTRV
0141 GDLGLGQQQL VEIAKALNKQ VRLLILDEPT ASLTEQETSI LLDIIRDLQQ HGIACIYISH KLNEVKAISD
0211 TICVIRDGQH IGTRDAAGMS EDDIITMMVG RELTALYPNE PHTTGDEILR IEHLTAWHPV NRHIKRVNDV
0281 SFSLKRGEIL GIAGLVGAGR TETIQCLFGV WPGQWEGKIY IDGKQVDIRN CQQAIAQGIA MVPEDRKRDG
0351 IVPVMAVGKN ITLAALNKFT GGISQLDDAA EQKCILESIQ QLKVKTSSPD LAIGRLSGGN QQKAILARCL
0421 LLNPRILILD EPTRGIDIGA KYEIYKLINQ LVQQGIAVIV ISSELPEVLG LSDRVLVMHE GKLKANLINH
0491 NLTQEQVMEA ALRSEHHVEK QSV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TCCACAAAGA GAGCGAGCTG TAAGCGTTAC
-070 GCCCCAGCGC GGAGCGGGGG CGTGATTTCT CTCCATGCCG CGTGAATGAA TTGGCTTAGG TGGAGTCGTT
0001 atgccttatc tacttgaaat gaagaacatt accaaaacct tcggcagtgt gaaggcgatt gataacgtct
0071 gcttgcggtt gaatgctggc gaaatcgtct cactttgtgg ggaaaatggg tctggtaaat caacgctgat
0141 gaaagtgctg tgtggtattt atccccatgg ctcctacgaa ggcgaaatta tttttgcggg agaagagatt
0211 caggcgagtc acatccgcga taccgaacgc aaaggtatcg ccatcattca tcaggaattg gccctggtga
0281 aagaattgac cgtgctggaa aatatcttcc tgggtaacga aataacccac aatggcatta tggattatga
0351 cctgatgacg ctacgctgtc agaagctgct cgcacaggtc agtttatcca tttcacctga tacccgcgtt
0421 ggcgatttag ggcttgggca acaacaactg gttgaaattg ccaaggcact taataaacag gtgcgcttgt
0491 taattctcga tgaaccgaca gcctcattaa ctgagcagga aacgtcgatt ttactggata ttattcgcga
0561 tctacaacag cacggtatcg cctgtattta tatttcgcac aaactcaacg aagtcaaagc gatttccgat
0631 acgatttgcg ttattcgcga cggacagcac attggtacgc gtgatgctgc cggaatgagt gaagacgata
0701 ttatcaccat gatggtcggg cgagagttaa ccgcgcttta ccctaatgaa ccacatacca ccggagatga
0771 aatattacgt attgaacatc tgacggcatg gcatccggtt aatcgtcata ttaaacgagt taatgatgtc
0841 tcgttttccc tgaaacgtgg cgaaatattg ggtattgccg gactcgttgg tgccggacgt accgagacca
0911 ttcagtgcct gtttggtgtg tggcccggac aatgggaagg aaaaatttat attgatggca aacaggtaga
0981 tattcgtaac tgtcagcaag ccatcgccca ggggattgcg atggtccccg aagacagaaa gcgcgacggc
1051 atcgttccgg taatggcggt tggtaaaaat attaccctcg ccgcactcaa taaatttacc ggtggcatta
1121 gccagcttga tgacgcggca gagcaaaaat gtattctgga atcaatccag caactcaaag ttaaaacgtc
1191 gtcccccgac cttgctattg gacgtttgag cggcggcaat cagcaaaaag cgatcctcgc tcgctgtctg
1261 ttacttaacc cgcgcattct cattcttgat gaacccacca ggggtatcga tattggcgcg aaatacgaga
1331 tctacaaatt aattaaccaa ctcgtccagc agggtattgc cgttattgtc atctcttccg aattacctga
1401 agtgctcggc cttagcgatc gtgtactggt gatgcatgaa gggaaactaa aagccaacct gataaatcat
1471 aacctgactc aggagcaggt gatggaagcc gcattgagga gcgaacatca tgtcgaaaag caatccgtct
1541 gaAGTGAAAT TGGCCGTACC GACATCCGGT GGCTTCTCCG GGCTGAAATC ACTGAATTTG CAGGTCTTCG
1611 TGATGATTGC AGCTATCATC GCAATCATGC TG
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