|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
2-1
(LD)
,
OCL10,16-3 (LD 2-1'_CRS)
(D)
,
OCL10,16-4 (LD 2-1'_P/O)
(D)
,
OCL13
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
bcsF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
bcsF
Search strains by all related name:
bcsF b3537 ECK3522 JW5663 o62 yhjT
|
General information (Go to Linear View: )
|
|
Gene Name
|
bcsF
|
|
Alternative name
|
b3537,ECK3522,JW5663,o62,yhjT
|
|
Location, Length
|
3,696,049 - 3,696,240
(
+
)
;
79.66
min
;
192
(bp) ,
63
(aa)
|
|
Product
|
hypothetical protein
|
|
Operon Name
|
bcsEFG
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
87082285
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YHJT_ECOLI
(
P37658
)
|
|
- Protein name
|
Hypothetical protein yhjT.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhjT; OrderedLocusNames=b3537, c4349, z4953, ECs4417;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
bcsF
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yhjT
|
|
PSI-BLAST
|
Hypothetical protein yhjT
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yhjT [Escherichia coli CFT073]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
|
| Sequences |
Amino acid
FASTA format
|
0001 MMTISDIIEI IVVCALIFFP LGYLARHSLR RIRDTLRLFF AKPRYVKPAG TLRRTEKARA TKK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AAAGTTCTAA ACCGGTCATC AATGCCGAGC
-070 ACGATGGTCG CCACTGGCGA CGAATACCAG AACCCATGCG ACTGTTAGAT GATGCTGTGG AGCGCTCATC
0001 atgatgacca tcagcgatat cattgaaatt attgtcgttt gcgcactgat atttttcccg ctgggctatc
0071 tggcgcggca ctctttgcga cgcattcgcg acaccttacg tttgttcttt gctaaacctc gttatgttaa
0141 accggccggg acgttacgcc gcacggaaaa agccagggca accaaaaaat gaCTCAATTT ACGCAAAATA
0211 CCGCCATGCC TTCTTCCCTC TGGCAATACT GGCGCGGCCT TTCCGGCTGG AACTTCTATT TTCTGGTTAA
0281 GTTCGGCCTG TT
|
